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I would like to use DRAM to annotate some protein predicted form various genomes, I know that in dram there is a flag annotate_genes in the pipeline. However, when I tried to use this as follow:
Traceback (most recent call last):
File "/glittertind/shared_conda_environments/DRAM/bin/DRAM.py", line 211, in <module>
args.func(**args_dict)
TypeError: annotate_called_genes_cmd() got an unexpected keyword argument 'config_loc'
Looking in the help:
--config_loc CONFIG_LOC location of an alternive config file that will over write the original at run time, but not be saved or modified (default: None)
But what is this config_loc file or how I can generate it?
I hope you can help us.
Best!
Arturo.
The text was updated successfully, but these errors were encountered:
Hi,
I would like to use DRAM to annotate some protein predicted form various genomes, I know that in dram there is a flag
annotate_genes
in the pipeline. However, when I tried to use this as follow:I got the following error:
Looking in the help:
But what is this config_loc file or how I can generate it?
I hope you can help us.
Best!
Arturo.
The text was updated successfully, but these errors were encountered: