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@U-BDS

UAB Biological Data Science Core

Welcome! 👋

UAB Biological Data Science Core

  • The UAB Biological Data Science Core (U-BDS) is an institutional resource which aims to provide services, foster long-term collaborations with the UAB research community, and provide training for biomedical investigators on a specific set of analysis tools and techniques.
  • The services we offer are listed here.
  • Our training website is available here.
  • Our enquiry form is available here.

Other resources:

  • We provide bi to tri-annual workshops which cover the fundamentals of programming (R, Python, Unix, git) with current plans to provide data analysis workshops. Please contact us for further information.
  • We are active members of the nf-core community. As part of this community, we provide the following support:
    • Aid across a variety of nf-core pipelines in our weekly office hours.
    • We are the maintainers of the Cheaha profile (to enable executor mode).
    • Some of the members from U-BDS are also the developers of the nf-core/scnanoseq pipeline. The main home for this pipeline can be found at the nf-core scnanoseq repository rather than U-BDS.

Pinned

  1. training_guides training_guides Public

    Compilation of training guides

    Shell 4

  2. scnanoseq scnanoseq Public

    Forked from nf-core/scnanoseq

    Single-cell/nuclei pipeline for data derived from Oxford Nanopore

    Nextflow

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