Popular repositories

1. lefse lefse Public

   Python 70 45

2. panphlan panphlan Public

   PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples

   Python 39 7

3. cmseq cmseq Public

   Set of utilities on sequences and BAM files

   Python 24 9

4. metaml metaml Public

   Python 21 11

5. viromeqc viromeqc Public

   ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichment score for each virome. The score is calculated with respec…

   Python 15 1

6. metamlst metamlst Public

   MetaMLST is a computational tool for in-silico Multi-Locus Sequence Typing from metagenomic data.

   Python 13 1