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Compare different differential abundance and expression methods

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Russel88/DAtest

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Travis Build Status Project Status: Active - The project has reached a stable, usable state and is being actively developed. Package-License

DAtest

DAtest is a package for comparing different differential abundance methods used in microbial marker-gene (e.g. 16S rRNA), RNA-seq and protein/metabolite abundance analysis.

There are many methods for testing differential abundance and no gold standard, but results can vary a lot between the different statistical methods. This package aims at aiding the analyst in choosing a method for a specific dataset based on empirical testing.

Check the wiki for details on installation and usage of this package