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Issues: RNAcentral/R2DT

Checklist for release 1.4
#86 opened Oct 27, 2022 by AntonPetrov
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Issues list

Use Typer and Rich
#133 opened Dec 8, 2023 by AntonPetrov
Switch to relative coordinates
#131 opened Dec 8, 2023 by AntonPetrov
6
Improve thumbnail images
#130 opened Dec 8, 2023 by AntonPetrov
Update Traveler to latest version
#128 opened Nov 29, 2023 by AntonPetrov
@AntonPetrov
Improve handling of sequences with MultipleHits warnings
#125 opened Nov 9, 2023 by AntonPetrov
@AntonPetrov
Bundle Rfam seeds into cms tarball? enhancement New feature or request
#124 opened Nov 9, 2023 by afg1
2
2
Possible off-by-one error?
#121 opened Oct 30, 2023 by pzhaojohnson
1
1
Speed up template selection using Ribovore + Blast
#115 opened Oct 9, 2023 by AntonPetrov
@AntonPetrov
Switch to Python API where possible good first issue Good for newcomers
#113 opened Oct 9, 2023 by AntonPetrov
Integrate with RNAFramework new feature
#108 opened Sep 25, 2023 by AntonPetrov
Feature request: Download RNA2D schema from R2DT widget
#101 opened Jul 26, 2023 by Psirving
@AntonPetrov
4
Include name in json schema output enhancement New feature or request
#100 opened May 24, 2023 by AntonPetrov
@AntonPetrov
Models missing in R2DT v1.3 cms
#99 opened Feb 1, 2023 by afg1
@AntonPetrov
1
Use alignments from tRNAscan-SE without re-creating them in R2DT
#98 opened Dec 3, 2022 by patriciaplchan
Use --detail option with tRNAscan-SE
#97 opened Dec 3, 2022 by patriciaplchan
@AntonPetrov
Temp file collision causing cluster jobs to hang
#96 opened Nov 25, 2022 by afg1
3
Infernal mapping not working for "depaired" and "constrained" structures bug Something isn't working
#93 opened Nov 4, 2022 by AntonPetrov
@AntonPetrov
View structures with pseudoknots
#91 opened Nov 1, 2022 by VonBoss
5
Use more precise SO terms for mt rRNAs
#87 opened Oct 27, 2022 by blakesweeney
Checklist for release 1.4
#86 opened Oct 27, 2022 by AntonPetrov
8 of 12 tasks
@AntonPetrov
r2dt/traveller segfault for some sequences/models bug Something isn't working
#81 opened Sep 29, 2022 by afg1
3
Store constrained folding and fold type info in tsv enhancement New feature or request
#80 opened Jun 28, 2022 by carlosribas
Create an option to display full sequence in Traveler's layout
#78 opened Jun 25, 2022 by aspetr01
@AntonPetrov
Label each nucleotide in SVG with the index of input sequence
#76 opened Jun 17, 2022 by blakesweeney
3
Integrate with JAR3D new feature
#72 opened Jun 1, 2022 by AntonPetrov
@AntonPetrov
1
ProTip! What’s not been updated in a month: updated:<2024-05-01.