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open2c/pairtools
open2c/pairtools Publicflexible suite of CLI tools for contact extraction (.pairs) from sequencing data (Hi-C, Micro-C and other chromosome capture methods)
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smithlabcode/preseq
smithlabcode/preseq PublicSoftware for predicting library complexity and genome coverage in high-throughput sequencing.
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SAMtoBAM/MUMandCo
SAMtoBAM/MUMandCo PublicMUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation
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higlass/higlass-python
higlass/higlass-python PublicPython bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer
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