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@IGDRion

IGDRion

Long read sequencing @ IGDR (UMR6290 - CNRS - UR1 - INSERM)
README.md

Pinned

  1. ANNEXA ANNEXA Public

    Nextflow pipeline to extend reference annotation with nanopore reads, classify novel genes (mRNAs vs lncRNAs).

    Python 6 3

  2. TransforKmers TransforKmers Public

    Jupyter Notebook 2

Repositories

Showing 6 of 6 repositories
  • EnrichRadar Public

    DESeq2 output viewer + make interactive filters

    R 2 0 0 0 Updated Jun 7, 2024
  • ANNEXA Public

    Nextflow pipeline to extend reference annotation with nanopore reads, classify novel genes (mRNAs vs lncRNAs).

    Python 6 3 0 0 Updated Jun 4, 2024
  • TransforKmers Public
    Jupyter Notebook 2 0 0 0 Updated Apr 29, 2024
  • ANNEXseq Public

    Nextflow pipeline to combine nanoseq and ANNEXA for long-read RNASeq data

    Nextflow 2 MIT 0 2 0 Updated Nov 15, 2023
  • BamType Public

    Quality control of newly discovered transcript annotation

    HTML 2 MIT 0 0 0 Updated Jun 30, 2023
  • .github Public

    IGDR Long Read (LR) github organization

    0 0 0 0 Updated Jun 27, 2023

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