Genomic Medicine Linköping
Popular repositories
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var-genes-ro
var-genes-ro PublicVirulence and Antibiotic Resistance Genes used with JASEN pipeline at the university hospital of Linköping, Sweden.
Jupyter Notebook
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Repositories
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- pgx_module Public Forked from JoelAAs/pgx_module
Anlysis of pharmacogenomic targets from Genomic Medicine Swedens heamatology panel.
- raredisease Public Forked from nf-core/raredisease
Call and score variants from WGS/WES of rare disease patients.
- gmsmetapost Public Forked from genomic-medicine-sweden/gmsmetapost
GMS Metagenomics post-classification
- KITM_fastq_preprocessing Public Forked from ljmesi/KITM_fastq_preprocessing
QC and trimming of fastq reads
- snakemake-wrappers Public Forked from snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
- taxprofiler Public Forked from nf-core/taxprofiler
Highly parallelised multi-taxonomic profiling of shotgun metagenomic data
- gms-artic Public Forked from genomic-medicine-sweden/gms-artic
A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics).
