Skip to content

Popular repositories

  1. snp-pipeline snp-pipeline Public

    SNP Pipeline is a pipeline for the production of SNP matrices from sequence data used in the phylogenetic analysis of pathogenic organisms sequenced from samples of interest to food safety.

    Python 54 31

  2. C-WAP C-WAP Public

    SC2 variant detection and composition pipeline

    HTML 15 8

  3. shigatyper shigatyper Public

    CFSAN Shigella Typing Pipeline

    Python 13 6

  4. snp-mutator snp-mutator Public

    Generate mutated sequence files from a reference genome.

    Python 10 4

  5. porerefiner porerefiner Public

    A tool for managing your pores

    Python 10

  6. vcftoolz vcftoolz Public

    Tools for working with Variant Call Format files.

    Python 8 3

Repositories

Showing 10 of 45 repositories

Top languages

Loading…

Most used topics

Loading…