MuSTA: Multi-Sample Transcriptome Assembly for long-read isoform sequencing
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Updated
Aug 9, 2020
MuSTA: Multi-Sample Transcriptome Assembly for long-read isoform sequencing
Role of CXCL9/10/11, CXCL13 and XCL1 in recruitment and suppression of cytotoxic T cells in renal cell carcinoma
Shiny app that recopilates all gene expression of zebra fish and informs about the tissue and developmental stage in which the gene is expressed.
Code to model distribution of transcript abundances.
The web genome viewer is live at https://icemduru.github.io/listeria_ro15_transcript/
Brivez is a bioinformatic tool thought as Quality of Life's improvement, providing high quantity of data in a snap, giving you a quick view on what you could find inside your transcriptome/sequences' list.
Inferring Transcript Phylogenies from Transcript Ortholog Clusters
Automated Isoform Discovery Detector (AIDD)
Regulatory-transcriptome-of-Head-and-Neck-Squamous-Cell-Carcinoma
Blast wrapper using snakemake to generate correspondance between a list of transcript or protein and some proteomes.
Snakemake pipeline to validate exfi's performance
Code to reproduce analyses in Iron Responsive Element (IRE)-mediated responses to iron dyshomeostasis in Alzheimer’s disease (Hin et al.)
Splice-aware Tool for Alignment of Pyrosequencing Reads
Back-end R package for running anexvis web application
A snakemake workflow for performing de novo transcriptome assembly, quality assessment and transcript quantification.
Comparing 3' single-end sequencing for genome and txome
⏳ Online graphical interface to explore age-related gene expression alterations in 49 GTEx human tissues
Peptide Mapping in Genome and peptide Detection in Transcriptomes
Transcriptome analytic tools for non-model organism
Polytranscript risk scoring (PTRS)
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