An SBML parser written in Rust.
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Updated
Sep 30, 2021 - Rust
An SBML parser written in Rust.
CyberUnits is a cross-platform class library for rapid development of high-performance computer simulations in life sciences. It supports modelling for biomedical cybernetics and systems biology with Object Pascal.
Lecture SS 2022 - Introduction to various topics in Systems Biology
Dynamical analysis of minimnal networks based on approximate majority algorithm (AM)
Matlab code for resource balance analysis
Julia interface to BioMASS
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Matlab code for Metabolic Economics calculations
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Parinsula is an interactive visual simulator of relatively isolated systems, which are a particular type of complex system.
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Matlab code and data for Enzyme Cost Minimisation
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Metabolic Network Toolbox for MATLAB
Spatial Model Simulator with SBML Model
A text-based computational framework for patient -specific modeling for classification of cancers. iScience (2022).
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pymCADRE enables the reconstruction of tissue-specific metabolic models in Python using transcriptomic data and information of the network topology.
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