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Dec 3, 2018 - Python
Synthetic biology
Synthetic biology (SynBio) is a multidisciplinary area of research that seeks to create new biological parts, devices, and systems, or to redesign systems that are already found in nature.
Here are 185 public repositories matching this topic...
Build Sensing-Enabling Metabolic Pathways from RetroPath2.0 output
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Jan 3, 2023 - HTML
An API for the Java-based synthetic biology simulation tool, iBioSim.
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Nov 1, 2022 - JavaScript
A protocol to enable the exchange of goods and services on the Bionet
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Jul 21, 2023 - Solidity
Simplistic Metabolic Model of the 2017 UNCA iGEM Project. (TCEasy)
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Nov 10, 2017 - Jupyter Notebook
Convert rpSBML file to SBOL + CSV files ready to be used by DNA-Bot.
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May 17, 2023 - Python
demonstration of methods implemented in my thesis "Robustness assessment of the biological processor using hyperellipsoids"
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Sep 4, 2020 - Jupyter Notebook
The source code for an upgraded version of the 2022 Stanford team wiki.
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Aug 2, 2022 - JavaScript
Official development repository for the iGEM IISER Thiruvananthapuram 2021 team wiki.
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Oct 21, 2021 - HTML
Additional data for matser_thesis in UST
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Sep 15, 2022 - HTML
My code as part of the Dry Lab team at iGEM McGill
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May 14, 2024 - Jupyter Notebook
Automatic calculation of specific growth rate from time-course assay data carried on microplate reader (bacterial cells)
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Jul 8, 2019 - MATLAB
Code and data used for Ng et al. (2019; Nature)
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Oct 16, 2020 - Jupyter Notebook
Diffusion model of a system where sender strains produce AHL and has induced motility in the presence of arabinose. AHL diffuses and motility in receiver strains.
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May 7, 2021 - Python
The development repository of the wiki for the Warwick iGEM 2021 team entry
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Dec 1, 2021 - Shell
The source code for the 2022 Stanford team wiki. This was submitted to the 2022 International Genetically Engineered Machines competition as a major deliverable.
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Dec 17, 2022 - JavaScript
Designing synthetic bacterial communities for predictable plant phenotypes
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Oct 15, 2019 - R
Software tools developed in connection with the design, construction, and evaluation of toehold switches for applications in synthetic biology.
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Jan 12, 2023 - Jupyter Notebook
Destruction of Aqueous Microfibers Enzymatically (DAME): A novel Synthetic Biology systems approach to destroying Polyester-based Microplastic fibers
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Jul 29, 2020
CAD tool that automatically identifies orthogonal chemical communication channels for the design of synthetic consortia
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Jun 19, 2018 - MATLAB
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