Official git repository for Biopython (originally converted from CVS)
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Updated
Jun 7, 2024 - Python
Official git repository for Biopython (originally converted from CVS)
Picotti lab data analysis package.
Protein language models-assisted optimization of a uracil-N-glycosylase variant enables programmable T-to-G and T-to-C base editing
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Protein Graph Library
Fusion of protein sequence and structural information, using denoising pre-training network for protein engineering (zero-shot).
Less-wrong single-file Numba-accelerated Python implementation of Gotoh affine gap penalty extensions for the Needleman–Wunsch, Smith-Waterman, and Levenshtein algorithms for sequence alignment
A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays.
Simplified DSSP algorithm implemented in Julia
A collection of tools to analyse biophysical data. Written mostly in R and Python.
GPT-based protein language model for PTM site prediction
A spectacularly simple package for working with peptide sequences.
Extraction of correlations from multistate PDB protein coordinates
Saprot: Protein Language Model with Structural Alphabet
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