Gene Drive (CRISPR) population crash simulation.
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Updated
Jun 9, 2024 - Python
Gene Drive (CRISPR) population crash simulation.
Toolkit for Population Genetic Statistics from Pool-Sequenced Samples, e.g., in Evolve and Resequence experiments
Application of pan-genome for population
Simulation and inference on exact solutions of coalescent distributions under diverse demographic scenarios.
An analysis and visualization platform for 'omics data
Population genetic simulations in R 🌍
A library for working with phylogenetic and population genetic data.
A set of programs in Julia designed to efficiently simulate range expansions.
A fully reproducible and state-of-the-art ancient DNA analysis pipeline
Simulate overwintering bottlenecks in wild fly populations
scCTS: identifying the cell type specific marker genes from population-level single-cell RNA-seq
Quantitative and population genetics analyses of populations, pools, half-sib/full-sib families, and polyploids
Analysis pipleine to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and mutational signature deconvolution)
API for MRC-IEU OpenGWAS platform (https://gwas.mrcieu.ac.uk)
Population Genomics Analysis for Plasmodium falciparum
Scripts for performing population genetics analysis and associated visualizations from data produced by CLC Genomics Workbench v 9.5
An open-source toolkit for large-scale genomic analysis
vcfpp.h + htslib + Rcpp = fast VCF/BCF https://doi.org/10.1093/bioinformatics/btae049
PopPUNK 👨🎤 (POPulation Partitioning Using Nucleotide Kmers)
Ultra-Fast Principal Component Analysis All in One
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