A Mac screensaver derived from @trvrb's coaltrace
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Updated
Jul 11, 2014 - Objective-C
A Mac screensaver derived from @trvrb's coaltrace
Jupyter notebook for RNA evolutionary algorithm and subsequent population genetics and BioPython tools.
Zhian Kamvar's Ph. D. dissertation from Oregon State University
A collection of C and C++ programs and simulations related to population genetics and/or methods that could be used in population genetics.
The LaTeX source for my PhD Thesis, the viva for which took place in September, 2016.
Closed - Moved to new repo
Phylogeographic text-mining platform
VectorBase Population Biology Map
The aim is to create an interactive simulation that can be used by a biologist who has little to no background in computation/programming to simulate all combinations of evolutionary factors while allowing her to control as many parameters as practical.
A population genetics simulator for two population with migration and different generation time.
BORICE is free software developed by Vanessa Koelling, Patrick Monnahan, and John Kelly to estimate the mean outcrossing rate and inbreeding coefficient of populations using Bayesian methods.
Course Material for 2015 SystemsX.ch/SIB Autumn School
A Docker repository for a course on analysis of genomic data
Population genetic analyses of seeded and wild populations of Texas bluebonnet (Lupinus texensis).
Annotation and Analysis of Deep Sequencing Variants from CirSeq
Ram, Liberman & Feldman (2018) Vertical and Oblique Transmission under Fluctuating Selection, PNAS
A population genetics simulator
Barton and Zeng (2018) - Pipeline for testing anavar with simulated data.
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