ngs-analysis
Here are 192 public repositories matching this topic...
NGSハンズオン講習会2016年 NGS解析基礎、RNA-seq、Reseq、ChIP-seq資料
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Apr 12, 2017
WIP & POC: Count Viral and other non-human genome signatures in Human NGS data
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Aug 15, 2017 - Shell
Example files for Benin NGS capacity building project
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Oct 31, 2017 - HTML
SRSF shape analysis framework for sequencing data
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Dec 1, 2017 - R
SRSF framework for nucleosome positioning analysis
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Feb 5, 2018 - PostScript
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Mar 17, 2018 - Python
Fast and accurate single sample SNV caller
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May 2, 2018 - C++
Coverage graph creator from BAM files (included in the SSV-Conta package)
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Jun 14, 2018 - Python
Extract unmapped read fragments from a sequence alignment map by evaluating it's concise idiosyncratic gapped alignment reports (CIGARs)
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Jun 20, 2018 - TypeScript
Collection of Scripts used for Population Genetic Study of RNAi Genes Duplications in Drosophila
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Jul 23, 2018 - R
A QC pipeline for SVs calls based on coverage and SNP calls
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Aug 15, 2018 - R
FastC aims to provide a simple way to do some quality control checks on treated sequence data. It is similar to FastQC allowing a comparative study between raw and processed data.
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Aug 16, 2018 - C++
Mobile Element Insertion Breakpoint Analyzer (MEIBA)
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Jan 2, 2019 - Python
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Feb 5, 2019 - Ruby
Snakemake pipeline to merge gnomAD VCF files
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Jun 21, 2019 - Python
🐳 Galaxy Docker repository for NGS Analysis (#2)
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Aug 15, 2019 - Dockerfile
Computational Suite For Bioinformaticians and Biologists (CSBB) provides 18 modules focused on analytical tasks like performing upper-quantile normalization, interactive visualization and next generation sequencing pipelines. CSBB now also has capability to process public data. Providing User with End to End pipeline experience
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Sep 26, 2019 - Perl
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