Automatic classification of bacterial species using Gram-stained images
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Updated
Apr 14, 2019 - R
Automatic classification of bacterial species using Gram-stained images
Finding viable restriction enzymes from NEB given an amino acid sequence.
semi-automated regular-unit counting using photos
In silico Promotor Detektion von Oberflächen-assoziierten Faktoren und ausgewählten Resistenzgenen in Staphylococcus aureus
Code to measure the square area of colonies in an image file and export the data.
iJV803: a genome-scale metabolic model for Methylomicrobium album BG8
Undergraduate course on Microbiology
An R package to help you PLAying with your genomic DAta.
A list of useful resources in the microbial colony classification and detection, such as datasets, papers, links to projects
A library to get information on organisms and UniProt identifiers. This includes growth temperature, growth ph, pfam domains, taxonomic lineage.
LI Detector analytical pipeline for colony-based high-throughput screens.
🔬 Micro Memory Game - The game for microbiologists => hardfork from https://github.com/vinicius73/vue-pokemon-memory-game
MetaGEN - an all-in-one solution for streamlined metagenomic analyses
Variant barcoding pipeline using single nucleotide polymorphisms (SNPs) for the generation of M. orygis standardised markers for diagnostic and epidemiological use.
gmx_wheel+ is a tool for analysing and visualizing the orientation of helical antimicobial peptides based on molecular dynamics simulations
From second generation sequencing reads to annotated bacterial genome
Photo examples of positive controls found in a micro foods lab (pdf made with LaTeX)
The Subcelloc script provides an easy way to determine the subcellular localization of a large datasets.
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