Fork of library used in reading xtc files from GROMACS simulations
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Updated
Mar 9, 2017 - C
Fork of library used in reading xtc files from GROMACS simulations
Benchmarking MDAnalysis with dask.
Benchmarking MDAnalysis with Dask (and MPI). Supplementary Information for SciPy 2017 paper.
Solvent network analysis. Hop is a python package based on MDAnalysis to analyze solvation dynamics.
Compilation of different scripts used for my MD analysis
Analyse Rotational Diffusion Tensor from MD Simulations
Python module: Calculation of helices angle during MD
a logistics and persistence engine for the analysis of molecular dynamics trajectories
Analysis of molecular dynamics trajectories or conformational ensembles in terms of spin-label distances as probed in double electron-electron resonance (DEER) experiments.
Tutorial for SPIDAL presentation at workshop, showing how to use Midas radical.pilot to analyze an ensemble of MD trajectories with Path Similarity Analysis (as implemented in MDAnalysis).
Face recognition using various classifiers
Cookiecutter repo for MD analysiS -standalone-.
A package for molecular dynamics analysis and parallel tempering in GROMACS
Notebooks for interactive use on https://mybinder.org/
Analysis scripts for the CHARMM GUI Drude Prepper Paper
Tactic MMIC translator for MDAnalysis/MMSchema
pyLFDA is a tool which allows analysis of pairwise lipid force distribution along with other functions such as curvature and diffusion.
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