mdanalysis
Here are 51 public repositories matching this topic...
Python module: Calculation of helices angle during MD
-
Updated
Oct 30, 2019 - Python
Molecular Dynamics - Simulation Analysis and Preparation Suite
-
Updated
May 16, 2024 - Python
About This is code for analyzing the xtc file used in GROMACS, a molecular dynamics simulation program.
-
Updated
Nov 13, 2023 - Python
Auxiliary tools and scripts initially made for my PhD projects.
-
Updated
May 22, 2024 - Jupyter Notebook
pyLFDA is a tool which allows analysis of pairwise lipid force distribution along with other functions such as curvature and diffusion.
-
Updated
Feb 4, 2022 - Jupyter Notebook
Python code for publication investigating Synaptotagmin-1 membrane interaction
-
Updated
Jan 18, 2024 - Jupyter Notebook
Transfer Li ions from cathode to anode in MD simulations
-
Updated
Apr 16, 2024 - Shell
Cookiecutter repo for MD analysiS -standalone-.
-
Updated
Dec 14, 2020 - Python
Face detection (class and pose) using various Classifiers - Own Implementation
-
Updated
Aug 29, 2022 - Jupyter Notebook
A batteries-included toolkit of analysis modules and helper functions for molecular dynamics (MD) simulations.
-
Updated
May 10, 2024 - Python
Command line interface for MDAnalysis
-
Updated
Jan 27, 2023 - Python
This is code for analyzing the gro/xtc file used in GROMACS, a molecular dynamics simulation program.
-
Updated
Nov 13, 2023 - Python
Analyze interactions between two fully-charged PAA chains with varying amounts of CaCl2 added
-
Updated
Dec 12, 2023 - Python
Analysis postprocessing utilities for my molecular dynamics simulations of LiTFSI-Ether mixtures
-
Updated
May 4, 2024 - Python
Molecular Dynamics Simulation of Alanine Dipeptide and Dihedral Angle Analysis
-
Updated
Jan 2, 2024 - Python
Benchmarking MDAnalysis with dask.
-
Updated
Sep 1, 2017 - Python
User friendly molecular dynamics simulation combining GROMACS and Google Colab: A complete guide
-
Updated
Jan 21, 2024 - Jupyter Notebook
Improve this page
Add a description, image, and links to the mdanalysis topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the mdanalysis topic, visit your repo's landing page and select "manage topics."