long-read
Here are 23 public repositories matching this topic...
Long read structural variants in rare disease cohort
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May 3, 2024 - Python
Analyse RNA feature distributions.
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Apr 29, 2024 - Jupyter Notebook
Toolkit for calling structural variants using short or long reads
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Apr 26, 2024 - Cython
Performs archiving and transfer of Nanopore sequencing data
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May 5, 2024 - Python
Fast and space-efficient taxonomic classification of long reads
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Mar 22, 2024 - C++
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
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Mar 18, 2024 - C++
A Python library to visualize and analyze long-read transcriptomes
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Mar 14, 2024 - Jupyter Notebook
Analyses of Penter, Borji & Nagler et al., 2023
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Nov 1, 2023 - R
Demultiplexing and debarcoding tool designed for LR-Split-seq data.
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Oct 19, 2023 - Python
tool for long read transcriptome assembly
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Aug 24, 2023 - Jupyter Notebook
MuSTA: Multi-Sample Transcriptome Assembly for long-read isoform sequencing
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Mar 1, 2023 - Shell
Merge transcriptome read-to-genome alignments into non-redundant transcript models
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May 23, 2024 - Perl
BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper
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May 16, 2022 - C++
Minor Variant Calling and Phasing Tools
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Jan 13, 2022
Suite of tools for use in genome assembly and consensus. Work in progress.
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Mar 22, 2021 - Go
A safe place for the personal scripts used in the long-read benchmarking project.
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Dec 23, 2020 - Shell
SIMulator for Long read transcriptome Analysis with RNA DecaY model
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Aug 10, 2020 - Python
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