Rust library to support interacting with Oxford Nanopore POD5 files
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Updated
Mar 11, 2024 - Rust
Rust library to support interacting with Oxford Nanopore POD5 files
a Python module to manipulate MIDS format.
A short tandem repeat (STR) genotyping and analysis toolkit for long reads
MinION Open-source Nucleotide Identifier for Continuous Analysis - Software for MinION sequencing quantitative metagenomic analysis in real time
Benchmarking variant callers for long read data
A tool for refining long-reads binning using kingdom level information
Scripts used to compare SVs detected from long read and long read assembly
NanoSwe: Analysing nanopore (PromethION) data of Swedish genomes
PuntSeq - Chasing the microbial diversity of Cambridge's freshwater
Identify inserted or deleted sequences from assemblies.
Lemur is a tool for rapid and accurate taxonomic profiling on long-read metagenomic datasets
Comparing 3 different metagenomics approaches with ONT's long read sequencing method
Codes for CLN3 public long-read RNA sequencing data analysis
Extreme lateral gene transfer into a fly autosome
Clair3-RNA - a long-read small variant caller for RNA sequencing data
Additional data for matser_thesis in UST
Generalizing deep learning-based variant callers via domain adaptation and semi-supervised learning
simON-reads ("Simulate Oxford Nanopore Reads") is a simple yet powerful tool to generate fastq files containing MiniON-like long reads
🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing
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