Web application and REST Api for parsers for the Grammars on succinct lipid nomenclature (Goslin).
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Updated
May 31, 2024 - Java
Web application and REST Api for parsers for the Grammars on succinct lipid nomenclature (Goslin).
Addressing n<<p biology problems with interpretable random forest results via partial dependence plots. - Construction of an ideal high-density lipoprotein
Ginkgo Bioworks' extensions and fixes to XCMS
Python & R scripts collection for AdipoAtlas project
Shiny app to have a look at the quality of -omics data.
Nara Marella
ADViSELipidomics is a novel Shiny app for the preprocessing, analysis, and visualization of lipidomics data.
This repository contains codes I wrote mostly in R to perform various kinds of analysis of multi-omics datasets.
R implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
This repository contains the script used to study blood pro-resolving mediators as biomarkers to predict the response of DMARD treatment in rheumatoid arthritis patients
Scripts and notes used in the iSLS11 workshop on data analysis
Abstract and Presentation Files for ADA 2017
pyLFDA is a tool which allows analysis of pairwise lipid force distribution along with other functions such as curvature and diffusion.
Reproducibility repo for Shashikadze et al. "Multi-omics profiling of lungs from genetically diabetic pigs reveals reduced ALOX15 levels and impaired eicosanoid switching as mechanisms contributing to a proinflammatory milieu".
Java implementation of the latest shorthand nomenclature.
A light weight and fast parser for reading mzML, mzXML and netCDF data files
My B.Sc. project involves a collaboration with the M3 Lab Group at SDU. The purpose is to create a Shiny app that will be published. My code will be used in the app to visualize and analysis Metabolomics, Lipidomics data.
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