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Jun 4, 2024 - Julia
gff3
Here are 39 public repositories matching this topic...
A genome visualization python package for comparative genomics
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May 26, 2024 - Python
This tool will convert GFF3 files into DDBJ annotation files. It was created to work with Braker2 generated GFF files, but should work with any other GFF3 file as well.
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May 23, 2024 - Python
BED-to-GFF3 converter that runs in parallel
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Apr 13, 2024 - Rust
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Apr 5, 2024 - Julia
Python programs for processing GFF3 files
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Mar 27, 2024 - Python
💻 Interconverting FASTA, GFF, and CSV.
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Mar 19, 2024 - Python
An efficient way to convert gff3 annotation files into EMBL format ready to submit.
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Mar 14, 2024 - Python
GenomeTools genome analysis system.
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Feb 10, 2024 - C
C# web tool for reading GFF3 files, filtering, ordering, extracting information into Excel, GFF3 files, CDS files, and comparing GFF3 data with FASTA and CDS files.
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Dec 30, 2023 - ASP.NET
A web application for interactive visualization and exploratory data analysis of variant call matrices
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Jul 17, 2023 - Svelte
Gff-toolbox is a toolbox of commands that enables one to get the gist of their GFF annotation files, as well as to analyse them in different ways.
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May 7, 2023 - Python
JSON-based FON (Feature Object Notation) format and tools to simplify genomic annotations usage
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Mar 9, 2023 - Python
final project of the advanced programming classes, course of Genomics bachelor degree - UniBo.
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Feb 16, 2023 - HTML
A tool to aggregate and load TB data to Neo4j
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Dec 8, 2022 - Python
Converts the string output of BPROM, a promoter prediction software tool, to the GFF3 file format. Used in a CPT Galaxy phage genomics workflow
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Jan 23, 2022 - Python
The AgBioData GFF3 working group has developed recommendations to solve common problems in the GFF3 format. We suggest improvements for each of the GFF3 fields, as well as the special cases of modeling functional annotations, and standard protein-coding genes. We welcome discussion of these recommendations from the larger community.
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Jan 3, 2022
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