Programming Life, contextproject 2015.
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Updated
Jun 21, 2015 - Java
Programming Life, contextproject 2015.
Script to automatically generate custom tracks to load on UCSC
A modern genome browser built with JavaScript and HTML5.
Desktop-based genome browser.
A pipeline for the integration of DNA methylation and hydroxymethylation data
Galaxy pipeline for the Mint
Simple and fast html5 canvas based genome browser
An application for browsing and running statistical analyses on genome FASTA files.
An AngularJS (1.x) directive, wrapping the Genoverse genome browser.
Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes
Reduce BAM file size by removing tags and quality information (>50 %) and/or downsampling.
Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.
Archive of personal scripts repository from my various projects in the Buell Lab at MSU (Jan. 2008 - Apr. 2011)
AWS Bucket (S3) to securely host files for genome web browsing
Millefy: Genome browser-like visualization of single-cell RNA-seq dataset
Interactive visulizations for track-based genomic data in R
An install script for the UCSC Genome Browser
A web app for viewing plasmid maps & genomes, and simulating PCR and Gibson assembly
Inter-sample analysis of SQANTI classifications
WashU Virus Genome Browser Documentation
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