(Legacy project) A modular laboratory experiment management suite, predecessor to qudi-core.
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Updated
Mar 27, 2024 - Python
(Legacy project) A modular laboratory experiment management suite, predecessor to qudi-core.
A Python toolbox for quantitative, reproducible flow cytometry analysis
ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.
Precision current source, with optional optical feedback, for driving LEDs and laser diodes
Everything within the Land model (Soil Plant Atmosphere Module, Land Hydrology, etc)
Burst analysis software for smFRET. **Moved to OpenSMFS organization**
Self-supervised models for encoding protein localization patterns from microscopy images
Modeling and Bayesian analysis of fluorescence and absorbance assays.
Utilities for pre-processing emission-excitation-matrix (EEM).
GLabViz - Interactive Analysis and Visualization Application for Scientific Data written in Python using Qt and pyqtrgaph
An open-source Raspberry-Pi based photobioreactor for cultivating and assessing physiology (photosynthesis & productivity) in microscopic algae.
Burst analysis software for single and multi-spot single-molecule FRET (smFRET) data.
DLTReconvolution - A Python based software for the analysis of lifetime spectra using the iterative least-square reconvolution method
An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader data, and removing debris and doublets and calibration of flow cytometry data.
Single-cell transcriptome analysis by fluorescence labeling
Analyze FRET Binding Data with R
iFISH Probe Design: a Python3 package to build iFISH probes.
Robust and unbiased estimation of the background distribution for fluorescence microscopy.
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