R and RR course material for the YRLS 2017 meeting

Consistent with up to date protocols, hs6PROCESS_INTERACTIVE processes raw backscattering data as sampled in natural water bodies using HOBI Labs Hydroscat-6 (hs6). hs6PROCESS_SEABASS should is also designed to be compatible with Hydroscat-4 and 2.

SUTD 2020 10.007 Modelling the Systems World 1D Project

An ImageJ plugin for intensity-based three-filter set (ratiometric) FRET 🔌

MicroManager 2.0 plugin for ratiometric widefield imaging

Random Laser simulation using COMSOL Multiphysics.

A backup of my evolving R scripts i write to process my research data. Data processing, thus far include climate data, thermal image and spectral data analysis. Please exercise caution while using these scripts and remember to adapt the code for your purpose or data.

Recipes for Anaconda

Fluorescence positioning system

A python code for analyzing photobleaching in fluorescence microscopy from a time series TIF image stack

Using Arduino and TSL250R-LF sensor to identify/compare fluorescence levels emitted from a green light triggered protein sample.

Simulation of Tumor Fluorescence Time Profiles

PyFDAP is a Python-based analysis framework for Fluorescence Decay After Photoconversion (FDAP) experiments.

QuEst - Quenching Estimator for fluorophores coupled to proteins - active development on gitlab.peulen.xyz

This repository contains a python code which calculates level populations and fluorescence efficiencies (g-factors) for atoms (or molecules) in the presence of a radiation field (e.g. the solar spectrum).

Here you can find some of my Arduino based projects

Fluorescence microscopy deconvolution scripts, using CUDA. DeltaVision and Zeiss Spinning-Disk formats supported.

Python scripts and data analysis templates for the analysis of time-tag time-resolved flourescence (cross-) correlation data acquired in live cell experiments