fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
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Updated
Apr 17, 2024 - Nim
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
A Tool to Annotate and Prioritize Exome Variants
Please consider using/contributing to https://github.com/nf-core/sarek
Target exome sequencing analysis for NYU NGS580 gene panel
🔅 State manager for deeply nested states
eXome Hidden Markov model (XHMM) - Copy Number Variants (CNVs) from Whole Exome Sequencing Data
WES HLA Typing based on multiple alternative tools
Statistical analysis on Mutation Annotation Format files from Whole-Exome Sequencing of Tumor samples and Controls.
Snakemake pipeline to validate exfi's performance
COverage Analysis Tool have been developed in 2016. It aims to automatically find bad quality regions of coding sequences in a set of sequencing data. It includes a graphical interface.
Exome Slicer - Application to evaluate sequencing quality when designing an Exome Slice (NGS virtual panel)
Cloud based analysis for Doctors, Researchers, Bioinformaticians and Developers.
Leveraging WES short reads for PAN-EXOME creation and analysis.
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