The mathematical modeling of the optimal strategy for influenza vaccination was studied using a transmission dynamics model that considered population movement, province, and age group
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Updated
Jun 4, 2024 - Jupyter Notebook
The mathematical modeling of the optimal strategy for influenza vaccination was studied using a transmission dynamics model that considered population movement, province, and age group
Regression Models for Epidemiology
Epidemiology modelling framework for the Thanzi la Onse project
Python package for statistical inference and forecast of epi models using multiple signals
Bayesian spatial analysis
[Under active development] Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models
Detect iSNV and construct whole viral genomes from metagenomic samples
An API, a query engine, and a database schema for genomic sequences; currently with a focus on SARS-CoV-2
Personal page of Julien Arino
Optimization of Self- or Parent-Reported Psychiatric Phenotypes in Longitudinal Studies
R Package for Analyzing John Snow's 1854 Cholera Map
CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.
R package with tools for estimating vaccine effectiveness and vaccine related metrics
CRAN Task View: Epidemiology
Repository for the R for Epidemiology book
Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://doi.org/10.18637/jss.v104.i03.
The Visualization Multitool for Molecular Epidemiology and Bioinformatics
R interface to the CDC National Public Health Tracking Network API
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