A new version of the code to simulate the oxDNA/oxRNA models, now equipped with Python bindings
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Updated
May 17, 2024 - C++
A new version of the code to simulate the oxDNA/oxRNA models, now equipped with Python bindings
Data intensive science for everyone.
Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates
This repo is the working area for ARMS-MBON event and omics data: data are collected, harvested, combined, reformatted
Official code repository for GATK versions 4 and up
NAUniSeq: A fast computational pipeline to search unique sequences for microbial diagnostics
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
UGENE is free open-source cross-platform bioinformatics software
tools for working with genome variation graphs
practice using Binary Search Trees to analyze DNA.
programs and scripts, mainly python, for analyses related to nucleic or protein sequences
A Python application to find and classify tetrads and quadruplexes in DNA/RNA 3D structures
DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models
Official git repository for Biopython (originally converted from CVS)
Repository for course project in Bioinformatics Institute 2023-2024
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