tools for reading, writing, merging, and remapping SNPs

tools for genetic genealogy and the analysis of consumer DNA test results

🧬Chromosome Visualizations

Simple genetic data analysis for GEDKeeper

Chromosome polymer simulations and in silico capture experiments

Node2Vec and PCA on Hi-C matrices for detecting chromosome translocations.

A dotplot generator for large chromosomes

Measures the integral radial density of a fluorescent signal in a nucleus of any shape

Research work on the search for tRNA-like sequences in the human genome. National Research Nuclear University MEPhI (Moscow Engineering Physics Institute)

collection of examples / demos for python 'datadraw' package, organized as a flask app

Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species

HTML widget for displaying IBD segments in an interactive ideogram using Ideogram.js

A plugin to estimate chromosome sizes from karyotype images.

Banding pattern extraction and banding pattern segmentation mask generation for stained banded chromosome images.

The library provides a general genetic algorithm. It is simple, easy to use, and very fast. All you need to do is to define the fitness function and its variables. There are many examples of how to deal with classic genetic algorithms problems.

Meta-chromosome genome files and scripts

Evolutionary Chromosome Breakpoints Validator

Gexplora - user-interface to analyse genomic elements along chromosomes

Visualize your DNA segments from gedmatch, ftdna, myheritage, 23andme

Machine Learning (ML) research within medicine and healthcare represents one of the most challenging domains for both engineers and medical specialists. One of the most desired tasks to be accomplished using ML applications is represented by disease detection. A good example of such a task is the detection of genetic abnormalities like Down synd…