A de novo genome breakpoint sequence assembly algorithm
-
Updated
Dec 11, 2018 - C
A de novo genome breakpoint sequence assembly algorithm
Roche entry into Precision FDA hackathon
Assessing dIfferential expression, dispersion, distribution analyses on TCGA tumour-normal RNA-seq datasets
Analyzing the statistical differences and frequency of the genotype of cancer-risk SNPs between different human populations.
A prototype for the Exceptional Responder tool.
A statistical approach for clonal deconvolution in cancer using longitudinal NGS data
A simulation to learn about cancer and mutations, based on Cancer Genome Interpreter
Classification of high risk and low risk cancer patients using Convolutional Neural Network and Mutli-Layer Perceptron.
a collection of notebooks containing analysis and visualization methods with publicly available data
Course Assignment on Clustering of Spatial Transcriptomics Data
This site provides complete information on a review written on cancer resoureces
Predicting the Probability or Occurrence of Relapse for Colorectal Cancer Patients using Gene Expression Data
MSc project for Bioinformatics with Systems Biology at Birkbeck, University of London
Tool for analyzing the inter-mutational distances between SNV-SNV and INDEL-INDEL mutations. Tool separates mutations into clustered and non-clustered groups on a sample-dependent basis.
Analysing single-cell and DSP data to test the effect of copper chelation with TEPA in Neuroblastoma mice
Lab website.
My lab book for current project: Identifying structural variation in WGS data
The ENsemble Fusion (EnFusion) repo contains a Dockerfile to build a Docker Image that can overlap outputs from 7 fusion detection algorithms, to identify high confidence fusion events.
FiMO is a method for placing mutations on clonal phylogeny under Finite-site assumption
This repository houses a workflow that uses biological feature trees to segregate cancer RNA-seq datasets, then it trains machine learning models to predict the presence or absence of known, cancer-associated DNA-level mutations.
Add a description, image, and links to the cancer-genomics topic page so that developers can more easily learn about it.
To associate your repository with the cancer-genomics topic, visit your repo's landing page and select "manage topics."