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The output of these is a clusterRes_cluster.tsv file including the representative sequences and the cluster members, and a clusterTax file with the taxonomy for each sequence.
My question is, is there any MMseqs2 implementation to obtain the common taxonomy for each cluster, like an LCA algorithm applied to all the sequences belonging to each cluster, or something similar? Or another software that allows me to do that?
Thanks in advance
The text was updated successfully, but these errors were encountered:
Hi, I have been using MMseqs2 to obtain clusters of multiple sequence files and then obtain each sequence's taxonomy. I followed this pipeline:
The output of these is a clusterRes_cluster.tsv file including the representative sequences and the cluster members, and a clusterTax file with the taxonomy for each sequence.
My question is, is there any MMseqs2 implementation to obtain the common taxonomy for each cluster, like an LCA algorithm applied to all the sequences belonging to each cluster, or something similar? Or another software that allows me to do that?
Thanks in advance
The text was updated successfully, but these errors were encountered: