{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":666447323,"defaultBranch":"main","name":"reaxpro-wrappers","ownerLogin":"simphony","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-07-14T14:39:20.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/8048249?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1696449291.0","currentOid":""},"activityList":{"items":[{"before":"9660d1f6d0f64250fb53535063bbca5d0d8aef21","after":"b78c5b9f1e14950c2a8ea2bc4e33b0c7f72755ad","ref":"refs/heads/main","pushedAt":"2023-10-04T19:54:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"Bump version v2.0.0 -> v3.0.0","shortMessageHtmlLink":"Bump version v2.0.0 -> v3.0.0"}},{"before":"d9163e39640dca4428036052f953f36bfb4bb7dc","after":null,"ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T19:14:06.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"}},{"before":"0c5c43768593ee6671a60aba95ab203d43eae5aa","after":"9660d1f6d0f64250fb53535063bbca5d0d8aef21","ref":"refs/heads/main","pushedAt":"2023-09-28T19:14:02.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"Fix/parsing lattice file (#18)\n\n* make references to original file instead of parsing them\r\n\r\n* update code with respect to parsing of structures\r\n\r\n* update unit tests\r\n\r\n* debug energy landscape refinement\r\n\r\n* debug adp\r\n\r\n* update syntactic settings\r\n\r\n* update wrapper tools for binding site calculation\r\n\r\n* update defaults in syntactic settings\r\n\r\n* make neighbour cut off optional in PES exploration\r\n\r\n* update wrong variable\r\n\r\n* update bad indent\r\n\r\n* debug initializing mesoscale model\r\n\r\n* mute neighbour cut off mapping for now\r\n\r\n* update default value for neighbor cut off\r\n\r\n* update wrong variable for process parallelization\r\n\r\n* update retrieval of mechanisms\r\n\r\n* update mode of temporary files\r\n\r\n* add function to replace site types\r\n\r\n* debug: print molar fractions and gas species\r\n\r\n* uncomment unneeded code lines\r\n\r\n* comment further lines for debug\r\n\r\n* debug:comment unneeded lines for cluster expansion\r\n\r\n* debug: comment unneeded lines\r\n\r\n* debug:update list indexing\r\n\r\n* move pz job out of get_rate-function\r\n\r\n* debug: print lattice ids\r\n\r\n* debug: print lattice ids\r\n\r\n* debug:add seek mechanism while writing to temp file\r\n\r\n* debug: update wrong variable\r\n\r\n* debug: add example which imports the graph at mesoscopic level\r\n\r\n* mute molar fraction for O2 in ADP\r\n\r\n* remove printing, change CO2 to CO\r\n\r\n* add needed comma to result output var\r\n\r\n* add needed comma in tuple\r\n\r\n* move from list to tuple\r\n\r\n* debug: print resulting data from scan job\r\n\r\n* debug:print settings\r\n\r\n* update wrapping function for snapshots, uncomment pressure division\r\n\r\n* remove float conversion in generic setting for zacros\r\n\r\n* also remove float conversion from other generic settings\r\n\r\n* move float conversion to other function and add asterisk\r\n\r\n* remove print statements, successfully run adp\r\n\r\n* update examples\r\n\r\n* correct indentation\r\n\r\n* add plot and update example\r\n\r\n* update engine paths\r\n\r\n* update function for mapping results\r\n\r\n* update path variables\r\n\r\n* update path keyword\r\n\r\n* update path variable","shortMessageHtmlLink":"Fix/parsing lattice file (#18)"}},{"before":"49062a88b833984a0e469a65481ac6cd033f0f4c","after":"d9163e39640dca4428036052f953f36bfb4bb7dc","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T18:42:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"update path variable","shortMessageHtmlLink":"update path variable"}},{"before":"f81566696bc3f2d91b12eb97f0d4d5e430ef2af4","after":"49062a88b833984a0e469a65481ac6cd033f0f4c","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T18:26:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"update path keyword","shortMessageHtmlLink":"update path keyword"}},{"before":"4f3805274cb2131c84afb3a30e41f22b2302cf56","after":"f81566696bc3f2d91b12eb97f0d4d5e430ef2af4","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T18:11:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"update path variables","shortMessageHtmlLink":"update path variables"}},{"before":"4b22df8c340255f0e53334ef125770f5abd82ec6","after":"4f3805274cb2131c84afb3a30e41f22b2302cf56","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T17:23:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"update function for mapping results","shortMessageHtmlLink":"update function for mapping results"}},{"before":"718fbc5b99fb060ee40ab8caf9f567183a7f2462","after":"4b22df8c340255f0e53334ef125770f5abd82ec6","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T16:32:22.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"Merge branch 'fix/parsing-lattice-file' of github.com:simphony/reaxpro-wrappers into fix/parsing-lattice-file","shortMessageHtmlLink":"Merge branch 'fix/parsing-lattice-file' of github.com:simphony/reaxpr…"}},{"before":"bb25ff91ab534f96c24fa5bd6d4c53aba94e074e","after":null,"ref":"refs/tags/v2.0.0","pushedAt":"2023-09-28T15:58:37.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"}},{"before":"f65270171bea2ab3a5ac47ac686d065d43297519","after":"718fbc5b99fb060ee40ab8caf9f567183a7f2462","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T15:46:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"add plot and update example","shortMessageHtmlLink":"add plot and update example"}},{"before":"ce5083b6858a994884fc4cd7566ced450d70bff1","after":"f65270171bea2ab3a5ac47ac686d065d43297519","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T15:15:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"correct indentation","shortMessageHtmlLink":"correct indentation"}},{"before":"35ba153e372bd3b2447bb3b5ebdcf0e79e6cd08c","after":"0c5c43768593ee6671a60aba95ab203d43eae5aa","ref":"refs/heads/main","pushedAt":"2023-09-28T14:30:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"Bump version v1.7.0 -> v2.0.0","shortMessageHtmlLink":"Bump version v1.7.0 -> v2.0.0"}},{"before":"3158f84646a909590fdf18b60f578e9c88132e18","after":"35ba153e372bd3b2447bb3b5ebdcf0e79e6cd08c","ref":"refs/heads/main","pushedAt":"2023-09-28T14:29:04.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"fix/adp (#17)\n\n* make references to original file instead of parsing them\r\n\r\n* update code with respect to parsing of structures\r\n\r\n* update unit tests\r\n\r\n* debug energy landscape refinement\r\n\r\n* debug adp\r\n\r\n* update syntactic settings\r\n\r\n* update wrapper tools for binding site calculation\r\n\r\n* update defaults in syntactic settings\r\n\r\n* make neighbour cut off optional in PES exploration\r\n\r\n* update wrong variable\r\n\r\n* debug initializing mesoscale model\r\n\r\n* update default value for neighbor cut off\r\n\r\n* update wrong variable for process parallelization\r\n\r\n* update mode of temporary files\r\n\r\n* add function to replace site types\r\n\r\n* move pz job out of get_rate-function\r\n\r\n* mute molar fraction for O2 in ADP\r\n\r\n* update wrapping function for snapshots, comment pressure division\r\n\r\n* update examples","shortMessageHtmlLink":"fix/adp (#17)"}},{"before":"2c8c930b0fbf5b0caac5208663b9e04468b160f8","after":"ce5083b6858a994884fc4cd7566ced450d70bff1","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-28T14:07:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"update examples","shortMessageHtmlLink":"update examples"}},{"before":"fd65a7165a5cc1d903716bff87b977537463ee73","after":"2c8c930b0fbf5b0caac5208663b9e04468b160f8","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T18:14:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"remove print statements, successfully run adp","shortMessageHtmlLink":"remove print statements, successfully run adp"}},{"before":"d4d76eaf6bd76686ef691eb6d731956b09e0a3d4","after":"fd65a7165a5cc1d903716bff87b977537463ee73","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T18:09:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"move float conversion to other function and add asterisk","shortMessageHtmlLink":"move float conversion to other function and add asterisk"}},{"before":"962f49e4cd38d7dffd6c7b76ef85bd792765d455","after":"d4d76eaf6bd76686ef691eb6d731956b09e0a3d4","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T17:56:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"also remove float conversion from other generic settings","shortMessageHtmlLink":"also remove float conversion from other generic settings"}},{"before":"5a562ae977d823ec303b2bd965c6d49b49e53181","after":"962f49e4cd38d7dffd6c7b76ef85bd792765d455","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T17:50:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"remove float conversion in generic setting for zacros","shortMessageHtmlLink":"remove float conversion in generic setting for zacros"}},{"before":"0e31a9f95d24dc5db91b1f916b77e26e1ee6d0d5","after":"5a562ae977d823ec303b2bd965c6d49b49e53181","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T17:25:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"update wrapping function for snapshots, uncomment pressure division","shortMessageHtmlLink":"update wrapping function for snapshots, uncomment pressure division"}},{"before":"291a20d130c28df01afda978b47a755e3a9623f4","after":"0e31a9f95d24dc5db91b1f916b77e26e1ee6d0d5","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T16:57:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"debug:print settings","shortMessageHtmlLink":"debug:print settings"}},{"before":"75b11d7fcd4d959090966ef7c448738b6b472eb5","after":"291a20d130c28df01afda978b47a755e3a9623f4","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T16:37:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"debug: print resulting data from scan job","shortMessageHtmlLink":"debug: print resulting data from scan job"}},{"before":"a1f423abaa4a86d72bd3ed8c0c2a1b3871009320","after":"75b11d7fcd4d959090966ef7c448738b6b472eb5","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T14:26:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"move from list to tuple","shortMessageHtmlLink":"move from list to tuple"}},{"before":"ed73e01ea947b0268bbf706d1de0326681fd5710","after":"a1f423abaa4a86d72bd3ed8c0c2a1b3871009320","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T14:18:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"add needed comma in tuple","shortMessageHtmlLink":"add needed comma in tuple"}},{"before":"a2aec03d204b1953de89de4d2c089318ae465c3b","after":"ed73e01ea947b0268bbf706d1de0326681fd5710","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T14:15:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"add needed comma to result output var","shortMessageHtmlLink":"add needed comma to result output var"}},{"before":"d2e9e534ed3f923ccfec1c2c66536ae95e6b009a","after":"a2aec03d204b1953de89de4d2c089318ae465c3b","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T14:01:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"remove printing, change CO2 to CO","shortMessageHtmlLink":"remove printing, change CO2 to CO"}},{"before":"5583e70e093a5b5c405d63b75d3e7dfe3989c5ee","after":"d2e9e534ed3f923ccfec1c2c66536ae95e6b009a","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T13:55:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"mute molar fraction for O2 in ADP","shortMessageHtmlLink":"mute molar fraction for O2 in ADP"}},{"before":"2e70aa9d25aa89ab59347b65926391f78a14ef82","after":"5583e70e093a5b5c405d63b75d3e7dfe3989c5ee","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T12:34:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"debug: add example which imports the graph at mesoscopic level","shortMessageHtmlLink":"debug: add example which imports the graph at mesoscopic level"}},{"before":"9bc3c3bde9dd151eea1e4596f7bedbd73e897c05","after":"2e70aa9d25aa89ab59347b65926391f78a14ef82","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T09:22:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"debug: update wrong variable","shortMessageHtmlLink":"debug: update wrong variable"}},{"before":"4c9568e5e5f2d04bab7248ae8473ba67c1d06bbc","after":"9bc3c3bde9dd151eea1e4596f7bedbd73e897c05","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T08:59:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"debug:add seek mechanism while writing to temp file","shortMessageHtmlLink":"debug:add seek mechanism while writing to temp file"}},{"before":"de8e7a9bf1e181c8cec7c314dabda91ce08639e3","after":"4c9568e5e5f2d04bab7248ae8473ba67c1d06bbc","ref":"refs/heads/fix/parsing-lattice-file","pushedAt":"2023-09-26T08:11:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"MBueschelberger","name":null,"path":"/MBueschelberger","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/46421269?s=80&v=4"},"commit":{"message":"debug: print lattice ids","shortMessageHtmlLink":"debug: print lattice ids"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAADj5L6mQA","startCursor":null,"endCursor":null}},"title":"Activity · simphony/reaxpro-wrappers"}