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old-registry.json
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old-registry.json
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{
"name": "ropensciregistry",
"version": "1.9.8",
"updated": "2018-11-12",
"meta": {
"name": "Package name, also the name in the DESCRIPTION file, note that this may be different from the GitHub repo name",
"type": "Category - only packages included for now, may include others later",
"maintainer": "Package maintainer name",
"email": "Package maintainer email",
"status": {
"description": "Current state of the package, different from installable",
"levels": {
"good": "Everything is good, everything should work fine",
"hiatus": "Taking a break for a reason, e.g., waiting for next version of an API",
"deprecated": "Not maintaining any longer, though may still be installable"
}
},
"installable": "Logical - should the package install",
"ropensci_category": "ropensci category - a single string category to group packages by. acceptable set: ['altmetrics', 'data-access', 'data-analysis', 'data-publication', 'data-tools', 'data-visualization', 'databases', 'developer-tools', 'geospatial', 'http-tools', 'ignore', 'image-processing', 'literature', 'metadata', 'scalereprod', 'security', 'taxonomy']",
"category": "Category - what the package does/data it deals with",
"on_cran": "Logical - is the package on CRAN, if true, 'on_bioc' can not also be true",
"on_bioc": "Logical - is the package on Bioconductor, if true, 'on_cran' can not also be true",
"cran_archived": "Logical - if the package is on CRAN, is it archived? if not on CRAN == false",
"url": "Code repository URL, usually a GitHub repository",
"root": "Path to root of the R package (if an R package exists). If in root of repo, then zero length string",
"fork": "Logical - is the repo a fork",
"description": "Brief description of the package",
"badges": "Array - badges to create on our website"
},
"packages": [
{
"name": "alm",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "good",
"installable": false,
"ropensci_category": "altmetrics",
"category": "altmetrics",
"on_cran": true,
"on_bioc": false,
"cran_archived": true,
"url": "https://github.com/ropensci/alm",
"root": "",
"fork": false,
"description": "R wrapper to the almetrics API platform developed by PLoS API -other publishers have built on this and work out of the box: CrossRef, Copernicus Publishers, and the Public Knowledge Project (PKP)",
"badges": []
},
{
"name": "AntWeb",
"type": "package",
"maintainer": "Karthik Ram",
"email": "karthik.ram@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "data-access",
"category": "biology",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/AntWeb",
"root": "",
"fork": false,
"description": "Access data from the world's largest ant database. Maintained and developed by the California Academy of Science",
"badges": []
},
{
"name": "aRxiv",
"type": "package",
"maintainer": "Karl Broman",
"email": "kbroman@biostat.wisc.edu",
"status": "good",
"installable": true,
"ropensci_category": "literature",
"category": "literature",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/aRxiv",
"root": "",
"fork": false,
"description": "Access to the aRxiv preprint repository",
"badges": []
},
{
"name": "bmc",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "literature",
"category": "literature",
"on_cran": false,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/bmc",
"root": "",
"fork": false,
"description": "An R interface to Biomed Central (BMC) search API and full text XML",
"badges": []
},
{
"name": "bold",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "data-access",
"category": "biology",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/bold",
"root": "",
"fork": false,
"description": "R client for BOLD Systems (Barcode Of Life Database).",
"badges": []
},
{
"name": "citeulike",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "deprecated",
"installable": true,
"ropensci_category": "altmetrics",
"category": "altmetrics",
"on_cran": false,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/citeulike",
"root": "",
"fork": false,
"description": "R interface to CiteULike",
"badges": []
},
{
"name": "clifro",
"type": "package",
"maintainer": "Blake Seers",
"email": "blake.seers@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "data-access",
"category": "biology",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/clifro",
"root": "",
"fork": false,
"description": "An R client for New Zealand's National Climate Database",
"badges": []
},
{
"name": "dependencies",
"type": "package",
"maintainer": "Gavin Simpson",
"email": "ucfagls@gmail.com",
"status": "hiatus",
"installable": true,
"ropensci_category": "scalereprod",
"category": "infrastructure",
"on_cran": false,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/dependencies",
"root": "",
"fork": false,
"description": null,
"badges": []
},
{
"name": "dvn",
"type": "package",
"maintainer": "Thomas J. Leeper",
"email": "thosjleeper@gmail.com",
"status": "deprecated",
"installable": true,
"ropensci_category": "data-publication",
"category": "publication",
"on_cran": true,
"on_bioc": false,
"cran_archived": true,
"url": "https://github.com/ropensci/dvn",
"root": "",
"fork": false,
"description": "Programmatic interface to the DataVerse Network.",
"badges": []
},
{
"name": "ecoengine",
"type": "package",
"maintainer": "Karthik Ram",
"email": "karthik.ram@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "data-access",
"category": "biology",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/ecoengine",
"root": "",
"fork": false,
"description": "Retrieve 3+ MM records, checklists and photos from Berkeley's ecoengine",
"badges": []
},
{
"name": "elastic",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "databases",
"category": ["infrastructure","databases"],
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/elastic",
"root": "",
"fork": false,
"description": "An R client for Elasticsearch",
"badges": []
},
{
"name": "elife",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "deprecated",
"installable": true,
"ropensci_category": "literature",
"category": "literature",
"on_cran": false,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/elife",
"root": "",
"fork": false,
"description": "R interface to the eLife API",
"badges": []
},
{
"name": "EML",
"type": "package",
"maintainer": "Carl Boettiger",
"email": "cboettig@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "data-publication",
"category": ["publication", "metadata", "datasets"],
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/EML",
"root": "",
"fork": false,
"description": "An R package for reading, writing, integrating and publishing data using the Ecological Metadata Language (EML) format.",
"badges": []
},
{
"name": "floras",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "hiatus",
"installable": true,
"ropensci_category": "data-access",
"category": "biology",
"on_cran": false,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/floras",
"root": "",
"fork": false,
"description": "Web page scraping for eFloras, including the Flora of North America",
"badges": []
},
{
"name": "fulltext",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "literature",
"category": "literature",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/fulltext",
"root": "",
"fork": false,
"description": "An high level R interface to many different sources for full text (or nearly) scholarly texts, including PLOS, PMC, PeerJ, eLife, arXiv, and many more",
"badges": []
},
{
"name": "geojsonio",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "geospatial",
"category": "visualization",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/geojsonio",
"root": "",
"fork": false,
"description": "A package to convert many data formats to geoJSON or Bostock's topoJSON",
"badges": []
},
{
"name": "gender",
"type": "package",
"maintainer": "Lincoln Mullen",
"email": "lincoln@lincolnmullen.com",
"status": "good",
"installable": true,
"ropensci_category": "data-access",
"category": "history",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/gender",
"root": "",
"fork": false,
"description": "gender is an R package to encode gender based on names and dates of birth",
"badges": []
},
{
"name": "geonames",
"type": "package",
"maintainer": "Barry Rowlingson",
"email": "b.rowlingson@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "geospatial",
"category": "infrastructure",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/geonames",
"root": "",
"fork": false,
"description": "Grab data from the GeoNames geographical database which covers all countries and contains over eight million placenames",
"badges": []
},
{
"name": "gistr",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "scalereprod",
"category": "reproducibility",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/gistr",
"root": "",
"fork": false,
"description": "gistr is a light interface to GitHub's gists for R",
"badges": []
},
{
"name": "git2r",
"type": "package",
"maintainer": "Stefan Widgren",
"email": "stefan.widgren@gmail.com",
"status": "good",
"installable": true,
"ropensci_category": "scalereprod",
"category": "reproducibility",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/git2r",
"root": "",
"fork": false,
"description": "Git bindings from R",
"badges": []
},
{
"name": "gitr",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "deprecated",
"installable": true,
"ropensci_category": "scalereprod",
"category": "reproducibility",
"on_cran": false,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/gitr",
"root": "",
"fork": false,
"description": "git/github from R",
"badges": []
},
{
"name": "historydata",
"type": "package",
"maintainer": "Lincoln Mullen",
"email": "lincoln@lincolnmullen.com",
"status": "good",
"installable": true,
"ropensci_category": "data-access",
"category": "history",
"on_cran": true,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/historydata",
"root": "",
"fork": false,
"description": "An R package with datasets of interest to historians. It is primarily intended for pedagogic purposes in teaching historians how to use R",
"badges": []
},
{
"name": "IEEER",
"type": "package",
"maintainer": "Saul Wiggin",
"email": "saulwiggin@googlemail.com",
"status": "good",
"installable": true,
"ropensci_category": "literature",
"category": "literature",
"on_cran": false,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/IEEER",
"root": "",
"fork": false,
"description": "Interface to the IEEE Xplore Gateway",
"badges": ["in early development"]
},
{
"name": "mdextract",
"type": "package",
"maintainer": "Edmund Hart",
"email": "edmund.m.hart@gmail.com",
"status": "hiatus",
"installable": true,
"ropensci_category": "data-access",
"category": "biology",
"on_cran": false,
"on_bioc": false,
"cran_archived": false,
"url": "https://github.com/ropensci/mdextract",
"root": "",
"fork": false,
"description": "package to extract metadata from data",
"badges": []
},
{
"name": "mocker",
"type": "package",
"maintainer": "Scott Chamberlain",
"email": "myrmecocystus@gmail.com",
"status": "deprecated",
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"ropensci_category": "http-tools",
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