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Doing a package check using devtools;:check_rhub()
Fedora Linux, R-devel, clang, gfortran fails with message ...
ERROR: dependency ‘R2jags’ is not available for package ‘BTSPAS’
removing ‘/home/docker/R/BTSPAS’
Warning messages:
1: In i.p(...) : installation of package ‘rjags’ had non-zero exit status
2: In i.p(...) : installation of package ‘R2jags’ had non-zero exit status
3: In i.p(...) :
installation of package ‘/tmp/Rtmpn5SWFU/file12f62f21e46/BTSPAS_2024.4.1.tar.gz’ had non-zero exit status
installing source package ‘rjags’ ...
** package ‘rjags’ successfully unpacked and MD5 sums checked
** using staged installation
checking for pkg-config... /usr/bin/pkg-config
configure: WARNING: pkg-config file for jags 4 unavailable
configure: WARNING: Consider adding the directory containing jags.pc
configure: WARNING: to the PKG_CONFIG_PATH environment variable
configure: Attempting legacy configuration of rjags
checking for jags... no
configure: error: "automatic detection of JAGS failed. Please use pkg-config to locate the JAGS library. See the INSTALL file for details."
ERROR: configuration failed for package ‘rjags’
This issue is about the previous R-hub system, it does not apply to the new system, so I am closing it now. Please see https://r-hub.github.io/rhub/ for the new system, R-hub v2.
Doing a package check using devtools;:check_rhub()
Fedora Linux, R-devel, clang, gfortran fails with message ...
ERROR: dependency ‘R2jags’ is not available for package ‘BTSPAS’
Warning messages:
1: In i.p(...) : installation of package ‘rjags’ had non-zero exit status
2: In i.p(...) : installation of package ‘R2jags’ had non-zero exit status
3: In i.p(...) :
installation of package ‘/tmp/Rtmpn5SWFU/file12f62f21e46/BTSPAS_2024.4.1.tar.gz’ had non-zero exit status
** package ‘rjags’ successfully unpacked and MD5 sums checked
** using staged installation
checking for pkg-config... /usr/bin/pkg-config
configure: WARNING: pkg-config file for jags 4 unavailable
configure: WARNING: Consider adding the directory containing
jags.pc
configure: WARNING: to the PKG_CONFIG_PATH environment variable
configure: Attempting legacy configuration of rjags
checking for jags... no
configure: error: "automatic detection of JAGS failed. Please use pkg-config to locate the JAGS library. See the INSTALL file for details."
ERROR: configuration failed for package ‘rjags’
See https://builder.r-hub.io/status/original/BTSPAS_2024.4.1.tar.gz-ed4a5d245f014c3895b10f4cd13d79d5
Thanks
Carl Schwarz
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