Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

bamtools split ERROR: could not open basecalls.sort.REF_NM_001019297.2.bam for writing. #198

Open
weir12 opened this issue Oct 31, 2019 · 1 comment

Comments

@weir12
Copy link

weir12 commented Oct 31, 2019

Hi:
When I run the following command:bamtools split -in basecalls.sort.bam -reference
This error occurred:

bamtools split ERROR: could not open basecalls.sort.REF_NM_001019297.2.bam for writing.

So few error messages that I don't know what's going on.About 1k splied_bam have been generated in the output folder(The reference sequence has approximately 6k transcripts).I want say yes,transcriptome,not chromosome.
Thank you for helping me.

@linjunhao2124
Copy link

i met this problem too, have you solved it bro

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants