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big contig #184

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lw3259111 opened this issue Nov 21, 2018 · 0 comments
Open

big contig #184

lw3259111 opened this issue Nov 21, 2018 · 0 comments

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@lw3259111
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when the genome contig are longer than 536,870,912 bases, samtools will fail.

ftp://ftp.ensemblgenomes.org/pub/plants/release-38/fasta/hordeum_vulgare/dna/Hordeum_vulgare.Hv_IBSC_PGSB_v2.dna.toplevel.fa.gz

I have use the genome to assemble my reads,it failed to sort the bwa output bam file.
so, the samtools whether support longer contig?

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