{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"vip","owner":"molgenis","isFork":false,"description":"Variant Interpretation Pipeline","allTopics":["pipeline","genetics","variant-interpretation"],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":6,"issueCount":5,"starsCount":19,"forksCount":5,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-30T13:41:53.156Z"}},{"type":"Public","name":"GAP","owner":"molgenis","isFork":false,"description":"Genotyping Array Pipeline","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":2,"issueCount":13,"starsCount":2,"forksCount":8,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-28T13:58:31.064Z"}},{"type":"Public","name":"NGS_Automated","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":1,"issueCount":13,"starsCount":4,"forksCount":8,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-29T06:23:33.999Z"}},{"type":"Public","name":"ConcordanceCheck","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":2,"starsCount":0,"forksCount":6,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-22T07:56:24.974Z"}},{"type":"Public","name":"ngs-utils","owner":"molgenis","isFork":false,"description":"Collection of notes and scripts related to NGS","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":1,"issueCount":2,"starsCount":14,"forksCount":23,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-22T08:04:02.883Z"}},{"type":"Public","name":"PGx-pipeline","owner":"molgenis","isFork":false,"description":"Farmacogenetics pipeline","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":3,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-17T09:16:46.620Z"}},{"type":"Public","name":"nf_ngs_dna","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-05T12:09:14.492Z"}},{"type":"Public","name":"NGS_RNA","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":1,"issueCount":0,"starsCount":3,"forksCount":9,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-30T12:54:59.117Z"}},{"type":"Public","name":"Trendanalysis","owner":"molgenis","isFork":false,"description":"Generate Trendanalysis plots for standard diagnostic techniques. ","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-28T14:12:38.037Z"}},{"type":"Public","name":"NGS_DNA","owner":"molgenis","isFork":false,"description":"NGS DNA best practice pipeline for Illumina sequencing - alignment, variant calling, annotation and QC","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":19,"starsCount":15,"forksCount":17,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-17T10:15:09.465Z"}},{"type":"Public","name":"NGS_Demultiplexing","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":1,"issueCount":5,"starsCount":0,"forksCount":6,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-11T15:06:33.408Z"}},{"type":"Public","name":"gdi-localportal","owner":"molgenis","isFork":false,"description":"GDI implementation of Local portal: a Molgenis connected to REMS, with Keycloak and Postgres","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":1,"issueCount":0,"starsCount":1,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-26T11:39:00.465Z"}},{"type":"Public","name":"AGCT","owner":"molgenis","isFork":false,"description":"Array Genotyping Conversion Tool","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":1,"starsCount":1,"forksCount":5,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-02T12:49:30.984Z"}},{"type":"Public","name":"RD-Registry","owner":"molgenis","isFork":false,"description":"RD registry with Molgenis","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-17T06:26:42.457Z"}},{"type":"Public","name":"Imputation","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":1,"starsCount":1,"forksCount":3,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-18T08:59:51.965Z"}},{"type":"Public","name":"GWAS_UMCG_HPC","owner":"molgenis","isFork":false,"description":"This repository holds script to perform genome-wide association studies on the UMCG HPC","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-09-07T13:33:33.000Z"}},{"type":"Public","name":"molgenis-compute","owner":"molgenis","isFork":false,"description":"MOLGENIS Compute is a framework for bioinformatics which enables large scale data and computational workflow management in a distributed execution environment.","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":3,"issueCount":43,"starsCount":4,"forksCount":16,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-07-06T19:58:28.724Z"}},{"type":"Public","name":"ontologies","owner":"molgenis","isFork":false,"description":"General repository to contain ontologies","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-01-15T19:24:52.871Z"}},{"type":"Public","name":"league-of-robots","owner":"molgenis","isFork":true,"description":"Code and configs for deploying (virtual) HPC clusters.","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":12,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-07-12T12:23:06.586Z"}},{"type":"Public","name":"molgenis-pipelines","owner":"molgenis","isFork":false,"description":"Pipelines for NGS, imputation, gwas, ...","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":2,"issueCount":6,"starsCount":28,"forksCount":43,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-12-18T16:08:48.076Z"}},{"type":"Public","name":"gwas-subset","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-08-28T08:04:59.353Z"}},{"type":"Public","name":"molgenis-catalogue","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-08-28T06:56:39.177Z"}},{"type":"Public","name":"NGS_ScRNA","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-08-28T06:20:04.700Z"}},{"type":"Public","name":"NGS_Microbiome","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-08-28T06:12:38.694Z"}},{"type":"Public","name":"HMF_pipeline","owner":"molgenis","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-08-28T06:01:32.896Z"}}],"repositoryCount":25,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}