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Failing to process gene_presence_absence.csv file #63

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LovaRandriantseheno opened this issue Apr 30, 2023 · 0 comments
Open

Failing to process gene_presence_absence.csv file #63

LovaRandriantseheno opened this issue Apr 30, 2023 · 0 comments

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@LovaRandriantseheno
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LovaRandriantseheno commented Apr 30, 2023

Hello,

Has anybody encountered the same issue as me? When I load the csv file, I got this error:
gffs <- list.files(path = "../gffs/", pattern = "[.]gff$", full.names = TRUE)
gpa_csv <- "gene_presence_absence.Rtab"

library(pagoo)

p <- roary_2_pagoo(gene_presence_absence_csv = gpa_csv, gffs = gffs)

Reading csv file (roary).
Processing csv file.
Error in data.frame(..., check.names = FALSE) :
arguments imply differing number of rows: 180601, 0

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