Some times core fails to restart and I have to use SSH to fix

[felipecrs]

The problem

This is very similar to #79976, but happens VERY rarely now.

What version of Home Assistant Core has the issue?

core-2024.5.3

What was the last working version of Home Assistant Core?

No response

What type of installation are you running?

Home Assistant OS

Integration causing the issue

No response

Link to integration documentation on our website

No response

Diagnostics information

No response

Example YAML snippet

No response

Anything in the logs that might be useful for us?

❯ ha core logs
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
2024-05-16 02:47:07.288 WARNING (MainThread) [homeassistant.util.executor] Thread[SyncWorker_2] is still running at shutdown: File "/usr/local/lib/python3.12/threading.py", line 1030, in _bootstrap
    self._bootstrap_inner()
  File "/usr/local/lib/python3.12/threading.py", line 1073, in _bootstrap_inner
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
2024-05-16 02:47:07.312 WARNING (MainThread) [homeassistant.util.executor] Thread[SyncWorker_23] is still running at shutdown: File "/usr/local/lib/python3.12/threading.py", line 1030, in _bootstrap
    self._bootstrap_inner()
  File "/usr/local/lib/python3.12/threading.py", line 1073, in _bootstrap_inner
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
2024-05-16 02:47:07.337 WARNING (MainThread) [homeassistant.util.executor] Thread[SyncWorker_22] is still running at shutdown: File "/usr/local/lib/python3.12/threading.py", line 1030, in _bootstrap
    self._bootstrap_inner()
  File "/usr/local/lib/python3.12/threading.py", line 1073, in _bootstrap_inner
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
2024-05-16 02:47:07.360 WARNING (MainThread) [homeassistant.util.executor] Thread[SyncWorker_56] is still running at shutdown: File "/usr/local/lib/python3.12/threading.py", line 1030, in _bootstrap
    self._bootstrap_inner()
  File "/usr/local/lib/python3.12/threading.py", line 1073, in _bootstrap_inner
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
2024-05-16 02:47:07.384 WARNING (MainThread) [homeassistant.util.executor] Thread[SyncWorker_58] is still running at shutdown: File "/usr/local/lib/python3.12/threading.py", line 1030, in _bootstrap
    self._bootstrap_inner()
  File "/usr/local/lib/python3.12/threading.py", line 1073, in _bootstrap_inner
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
2024-05-16 02:47:07.407 WARNING (MainThread) [homeassistant.util.executor] Thread[SyncWorker_33] is still running at shutdown: File "/usr/local/lib/python3.12/threading.py", line 1030, in _bootstrap
    self._bootstrap_inner()
  File "/usr/local/lib/python3.12/threading.py", line 1073, in _bootstrap_inner
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
2024-05-16 02:47:07.434 WARNING (MainThread) [homeassistant.util.executor] Thread[SyncWorker_38] is still running at shutdown: File "/usr/local/lib/python3.12/threading.py", line 1030, in _bootstrap
    self._bootstrap_inner()
  File "/usr/local/lib/python3.12/threading.py", line 1073, in _bootstrap_inner
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
2024-05-16 02:47:07.456 WARNING (MainThread) [homeassistant.util.executor] Thread[SyncWorker_28] is still running at shutdown: File "/usr/local/lib/python3.12/threading.py", line 1030, in _bootstrap
    self._bootstrap_inner()
  File "/usr/local/lib/python3.12/threading.py", line 1073, in _bootstrap_inner
    self.run()
  File "/usr/local/lib/python3.12/threading.py", line 1010, in run
    self._target(*self._args, **self._kwargs)
  File "/usr/local/lib/python3.12/concurrent/futures/thread.py", line 89, in _worker
    work_item = work_queue.get(block=True)
Found 46 non-daemonic threads.
[05:47:34] INFO: Home Assistant Core finish process exit code 0
[05:47:34] INFO: Home Assistant Core service shutdown
s6-rc: info: service legacy-services successfully stopped
s6-rc: info: service legacy-cont-init: stopping
s6-rc: info: service legacy-cont-init successfully stopped
s6-rc: info: service fix-attrs: stopping
s6-rc: info: service fix-attrs successfully stopped
s6-rc: info: service s6rc-oneshot-runner: stopping
s6-rc: info: service s6rc-oneshot-runner successfully stopped
s6-rc: info: service s6rc-oneshot-runner: starting
s6-rc: info: service s6rc-oneshot-runner successfully started
s6-rc: info: service fix-attrs: starting
s6-rc: info: service fix-attrs successfully started
s6-rc: info: service legacy-cont-init: starting
s6-rc: info: service legacy-cont-init successfully started
s6-rc: info: service legacy-services: starting
services-up: info: copying legacy longrun home-assistant (no readiness notification)
s6-svwait: fatal: unable to s6_svstatus_read: No such file or directory
services-up: warning: some legacy longruns failed to start
s6-rc: warning: unable to start service legacy-services: command exited 1
/run/s6/basedir/scripts/rc.init: warning: s6-rc failed to properly bring all the services up! Check your logs (in /run/uncaught-logs/current if you have in-container logging) for more information.
/run/s6/basedir/scripts/rc.init: fatal: stopping the container.
s6-rc: info: service legacy-cont-init: stopping
s6-rc: info: service legacy-cont-init successfully stopped
s6-rc: info: service fix-attrs: stopping
s6-rc: info: service fix-attrs successfully stopped
s6-rc: info: service s6rc-oneshot-runner: stopping
s6-rc: info: service s6rc-oneshot-runner successfully stopped
[05:47:42] INFO: Home Assistant Core finish process exit code 256
[05:47:42] INFO: Home Assistant Core finish process received signal 15
s6-linux-init-hpr: fatal: unable to talk to shutdownd: Operation not permitted

Additional information

No response