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ClipKit #93

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ClipKit #93

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@cmorganl cmorganl commented Jun 7, 2022

Use ClipKit instead of BMGE.

Issue: #67

commit 5e1336a9fc796e2743727498a59842657082576b
Author: cmorganl <c.morganlang@gmail.com>
Date:   Sat Jun 18 14:32:19 2022 -0400

    Finish binning by sequence identity

commit 40d9165d8280aee0f3009fd03b8aaca757d8d779
Author: cmorganl <c.morganlang@gmail.com>
Date:   Sat Jun 18 13:46:09 2022 -0400

    Implement pairwise alignment against refpkg

commit 02a8471ef9b20bd0f6626c1952daefa2e57e65ff
Merge: a739274 1e45401
Author: cmorganl <c.morganlang@gmail.com>
Date:   Sat Jun 18 11:24:18 2022 -0400

    Merge branch 'clipkit' into seq_clumping

commit a739274b4abe7f005133ccb5ad8dd5b3768d192e
Author: cmorganl <c.morganlang@gmail.com>
Date:   Thu Jun 16 07:50:31 2022 -0400

    refactor HMM match binning
@cmorganl cmorganl linked an issue Oct 9, 2022 that may be closed by this pull request
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Replace BMGE with ClipKit
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