unable to install

[Shudesna]

Issue summary

I installed given requirements. set path for cuda 11.8, installed cudnn. its a Linuxmint latest version.

Steps to reproduce

during make -j12 encountered by error

Your system configuration

Operating system:
Compiler:
CUDA version (if applicable):11.8
CUDNN version (if applicable):8.9.7
Python version:Python 3.10.12

The error is given bellow

[ 49%] Generating _version.cpp
[ 49%] Generating _version.cpp
[ 50%] Building CXX object gninasrc/CMakeFiles/gninatyper.dir/lib/cnn_data.cpp.o
[ 50%] Building CXX object gninasrc/CMakeFiles/gninalib_static.dir/lib/cnn_data.cpp.o
[ 50%] Building CXX object gninasrc/CMakeFiles/gnina.dir/lib/flexinfo.cpp.o
c++: fatal error: Killed signal terminated program cc1plus
compilation terminated.
make[2]: *** [gninasrc/CMakeFiles/gnina.dir/build.make:209: gninasrc/CMakeFiles/gnina.dir/lib/cnn_data.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
[ 51%] Building CXX object gninasrc/CMakeFiles/gninalib_static.dir/lib/non_cache_cnn.cpp.o
c++: fatal error: Killed signal terminated program cc1plus
compilation terminated.
make[2]: *** [gninasrc/CMakeFiles/gninalib.dir/build.make:195: gninasrc/CMakeFiles/gninalib.dir/lib/cnn_data.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
[ 51%] Building CXX object gninasrc/CMakeFiles/gninalib_static.dir/lib/obmolopener.cpp.o
c++: fatal error: Killed signal terminated program cc1plus
compilation terminated.
make[2]: *** [gninasrc/CMakeFiles/gninalib_static.dir/build.make:195: gninasrc/CMakeFiles/gninalib_static.dir/lib/cnn_data.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
[ 52%] Building CXX object gninasrc/CMakeFiles/gninatyper.dir/lib/non_cache.cpp.o
[ 52%] Building CXX object gninasrc/CMakeFiles/gninatyper.dir/lib/non_cache_cnn.cpp.o
[ 52%] Building CXX object gninasrc/CMakeFiles/gninatyper.dir/lib/obmolopener.cpp.o
[ 52%] Building CXX object gninasrc/CMakeFiles/gninatyper.dir/lib/parallel_mc.cpp.o
[ 52%] Building CXX object gninasrc/CMakeFiles/gninatyper.dir/lib/parallel_progress.cpp.o
[ 54%] Building CXX object gninasrc/CMakeFiles/gninatyper.dir/lib/parse_pdbqt.cpp.o
c++: fatal error: Killed signal terminated program cc1plus
compilation terminated.
make[2]: *** [gninasrc/CMakeFiles/gninatyper.dir/build.make:223: gninasrc/CMakeFiles/gninatyper.dir/lib/cnn_data.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[1]: *** [CMakeFiles/Makefile2:1782: gninasrc/CMakeFiles/gnina.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
make[1]: *** [CMakeFiles/Makefile2:1728: gninasrc/CMakeFiles/gninalib.dir/all] Error 2
make[1]: *** [CMakeFiles/Makefile2:1755: gninasrc/CMakeFiles/gninalib_static.dir/all] Error 2
make[1]: *** [CMakeFiles/Makefile2:1893: gninasrc/CMakeFiles/gninatyper.dir/all] Error 2

[Shudesna]

CMakeCache.txt
CMakeOutput.log
CMakeRuleHashes.txt
TargetDirectories.txt

[dkoes]

Looks like the compiler is being killed. Is the out of memory killer (OOM) responsible? Check the system logs. Also, try a non-parallel build, which will take less memory.

[Shudesna]

ok sir

[Shudesna]

Thanks installation done. for me instead of make install (depict error) sudo maske install works. Calling gnina from every location (using terminal) responding.