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Phenotype file format for eQTL analysis #257

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SNgalaxy opened this issue Sep 15, 2021 · 0 comments
Open

Phenotype file format for eQTL analysis #257

SNgalaxy opened this issue Sep 15, 2021 · 0 comments
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Track bugs here. Please use google groups instead Support is handled on google groups

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@SNgalaxy
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Hi there,

I am running eQTL analysis and I have multiple samples from different biopsy locations in my expression data that I can not remove for my analysis. How does GEMMA handle the phenotypic format in this situation, considering that number of rows in the phenotype data should be the same as genotype data?

Thanks
@pjotrp pjotrp added the Track bugs here. Please use google groups instead Support is handled on google groups label Sep 16, 2021
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@pjotrp @SNgalaxy