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New Topic Request for Lipidomics #873

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lnanderson opened this issue Nov 18, 2023 · 3 comments
Open

New Topic Request for Lipidomics #873

lnanderson opened this issue Nov 18, 2023 · 3 comments
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bug Something isn't working concept/term addition Request for a new concept(s), or change(s) to existing concept(s) high priority
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@lnanderson
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lnanderson commented Nov 18, 2023

Topic name: < Lipidomics >

Short description: < the systematic identification and characterization of cellular lipid molecular species, lipid derivatives, and downstream lipidome interaction networks within a cell, tissue, organism, or ecosystem. Lipidomics is a concentrated topic area within metabolomics with a defined set of community standards for data reporting and naming classifications of structural diversity. Common mass spectrometry-based detection methods include LC-MS ESI, GC-MS, DESI, MALDI-MS, MALDI-MSI, etc.>

Parent URI(s): < http://edamontology.org/topic_3172 >

exactSynonym(s): < MS-based Lipidomics | Lipid Omics | LC–MS Lipidomics | untargeted Lipidomics | Shotgun Lipidomics | lipid metabolomics >

narrowSynonym(s): < Phospholipidomics >

Wikipedia: < https://en.wikipedia.org/wiki/Lipidomics >

Comment: < Exact Class Mappings include MESH:D000081362 and NCIT:C153193. Related term Mappings include edam:topic_0153 and MS:1002964. Common supported community databases include Lipid Maps, MassIVE, Metaspace, etc. Common lipid specie Classes include: fatty acyls (FA), glycerolipids (GL), glycerophospholipids (GP), sphingolipids (SP), sterol lipids (ST), prenol lipids (PR) , saccharolipids (SL), polyketides (PK). >

@lnanderson
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@matuskalas let me know if you need any additional information. Thank you, I appreciate your time!

@matuskalas
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Thank you so much @lnanderson for spotting this obvious gap and for the thorough description; highly appreciated! 🙏🏽🙏🏽

@matuskalas matuskalas self-assigned this Nov 18, 2023
@matuskalas matuskalas added bug Something isn't working concept/term addition Request for a new concept(s), or change(s) to existing concept(s) high priority labels Nov 18, 2023
@matuskalas matuskalas added this to To do in release 1.26 via automation Nov 18, 2023
@matuskalas matuskalas added this to the 1.26 milestone Nov 18, 2023
@matuskalas
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Note to myself & all who'll help: Worth checking out and curating the records in Bio.tools, too (especially the descriptions). Here are the most recent ones tagged with topic_0153:
image

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