[BUG] fmriprep output in native space does not have the 'space' entry so bidspm gets confused and does not run analyses for that space if requested

[marcobarilari]

Is there an existing issue for this?

• I have searched the existing issues

Operating system

• Linux
• Mac
• Windows

Operating system version

too lazy to look for that :)

SPM 12 version

• 7771
• 7487
• 7219

Platform

• MATLAB
• Octave

Platform version

• MATLAB 2018a

bidspm version

v3.1.0

bidspm branch / commit number

• main 7a40bb2

Expected Behavior

To selected eg "T1w" space and get the native space analysed

BIDS stats model

No response

Current Behavior & Error message

% copy the error you got below
% before the three backticks (```)

Anything else?

No response

[github-actions]

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[marcobarilari]

fmriprep run with ''MNI152NLin2009cAsym T1w'' as space entry

[Remi-Gau]

can you do a tree on that fmriprep dataset?

this sounds weird to me.

[Remi-Gau]

I am checking a random preprocessed dataset from openneuro and I am seeing both no space entity and space-T1w:

https://github.com/OpenNeuroDerivatives/ds003548-fmriprep/tree/main/sub-01/func