Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

"phenotype.tsv" referenced in part of validator, but this is not a BIDS file #1895

Open
sappelhoff opened this issue Feb 21, 2024 · 0 comments
Open

"phenotype.tsv" referenced in part of validator, but this is not a BIDS file #1895

sappelhoff opened this issue Feb 21, 2024 · 0 comments

Comments

@sappelhoff
Copy link
Member

bids-validator/bids-validator/bids_validator/tsv/non_custom_columns.json

Line 68 in 2d923f5

"phenotype": ["participant_id", "HED"],

In BIDS we have phenotype/<whatever-name>.tsv but not phenotype.tsv. See: https://bids-specification.readthedocs.io/en/stable/modality-agnostic-files.html#phenotypic-and-assessment-data

brought up by @VisLab in #1876
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@sappelhoff