/
Makefile.PL
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/
Makefile.PL
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#!/usr/bin/env perl
use inc::Module::Install;
name 'WormBase';
# Draw version, author, and licensing from Web.pm
all_from 'lib/WormBase/Web.pm';
# Catalyst basics
requires 'Catalyst::Runtime'; # => '5.80014';
requires 'Catalyst::Devel'; # REQ'D for development only
requires 'Task::Catalyst'; # A slew of basic Catalyst Goodies
requires 'parent';
# Catalyst Plugins and extensions
requires 'Catalyst::Action::REST';
requires 'Catalyst::Action::RenderView';
requires 'Catalyst::Action::RenderView::ErrorHandler';
requires 'Catalyst::Authentication::Credential::OpenID'; # will need to install Math::BigInt::GMP first
requires 'Catalyst::Authentication::Store::DBIx::Class';
requires 'Catalyst::Controller::FormBuilder';
requires 'Catalyst::Controller::CGIBin';
requires 'Catalyst::DispatchType::Regex';
requires 'Catalyst::Model::Adaptor';
#requires 'Catalyst::Model::Xapian::Result';
#requires 'Catalyst::Log::Log4perl';
requires 'Catalyst::Plugin::Authentication';
requires 'Catalyst::Plugin::Authorization::Roles';
requires 'Catalyst::Plugin::Cache'; # Cache interface
requires 'Catalyst::Plugin::ConfigLoader';
requires 'Catalyst::Plugin::ErrorCatcher';
requires 'Catalyst::Plugin::Unicode';
requires 'Catalyst::Plugin::Scheduler';
requires 'Catalyst::Plugin::Session';
requires 'Catalyst::Plugin::Session::PerUser';
requires 'Catalyst::Plugin::Session::State';
requires 'Catalyst::Plugin::Session::State::Cookie';
requires 'Catalyst::Plugin::Session::Store::DBI';
requires 'Catalyst::Plugin::StackTrace';
requires 'Catalyst::Plugin::Static::Simple';
requires 'Catalyst::View::JSON';
requires 'Catalyst::View::Email';
requires 'Catalyst::View::CSV' => '1.3'; # Export as CSV. Kinda hard to install. Sorry.
#requires 'Catalyst::View::GD';
# Application dependencies
requires 'Ace' => '1.92'; # Good 'ole AcePerl.
#requires 'AnyEvent::CouchDB'; #
requires 'Badge::GoogleTalk'; #
requires 'Bio::Perl' => '1.006001'; #
requires 'Bio::Graphics'; #
requires 'Bio::Graphics::Browser2::Markup';
requires 'Bio::DB::SeqFeature::Segment';
requires 'B::Hooks::EndOfScope'; #
requires 'Cache::Memcached::libmemcached'; #
requires 'CGI::Simple::Cookie'; #
requires 'Config::General'; #
requires 'Crypt::SaltedHash'; # => '0.06';
requires 'Crypt::SSLeay'; # For openid support
requires 'CHI'; # Cache
requires 'CHI::Driver::Memcached::libmemcached'; # Cache (in memory)
requires 'CHI::Driver::File'; # Cache (on disk)
#requires 'Class::MOP'; # => '1.12';
requires 'Class::Load';
requires 'Data::Dump'; #
requires 'Data::GUID'; #
requires 'Data::OptList'; #
requires 'DBI'; #
requires 'DBD::mysql'; #
requires 'DB_File::Lock'; #
requires 'Devel::GlobalDestruction'; #
requires 'Devel::StackTrace'; #
requires 'HTML::Parser'; #
requires 'HTML::Entities'; #
requires 'Facebook::Graph'; #
requires 'File::Spec::Functions';
requires 'GD'; #
requires 'GD::SVG'; #
requires 'GraphViz';
requires 'Hash::Merge';
#requires 'GO::Parser'; #
#requires 'GO::Utils'; #
#requires 'go-db-perl'; #
requires 'IO::Socket::PortState';
requires 'Statistics::R::IO'; # executing r codes
requires 'JSON'; #
requires 'JSON::Any';
requires 'JSON::Parse';
requires 'JSON::WebToken';
requires 'JSON::XS';
requires 'List::MoreUtils'; #
requires 'Log::Log4perl'; #
requires 'Log::Log4perl::Catalyst'; #
requires 'Math::BigInt::GMP'; # will need to install gmp.h header file first(on Debian/Ubuntu is the libgmp3-dev package)
requires 'Memcached::libmemcached'; #
requires 'Module::Install'; #
requires 'Module::Versions';
requires 'Moose' => '1.21'; #
requires 'MooseX::NonMoose'; # => '0.17';
requires 'MooseX::MethodAttributes::Inheritable'; # => '0.24';
requires 'MooseX::Role::WithOverloading'; # => '0.05';
requires 'MRO::Compat'; #
requires 'Net::Twitter'; #
requires 'Net::OAuth::Simple'; #
requires 'Net::Server::SS::PreFork'; #
requires 'Number::Format'; # Daemon controlling starman
requires 'namespace::clean'; #
requires 'namespace::autoclean'; #
requires 'Package::DeprecationManager' => '0.10'; #
requires 'Package::Stash' => '0.21'; #
requires 'Package::Stash::XS' => '0.18'; #
requires 'Params::Util'; #
requires 'Proc::Wait3';
requires 'Term::ReadLine'; #
#requires 'Search::Xapian'; #
requires 'Server::Starter'; # Daemon running starman
requires 'Sub::Exporter'; #
requires 'Sub::Install'; #
requires 'Sub::Identify'; #
requires 'SVG'; #
requires 'Switch';
requires 'Task::Weaken'; #
requires 'Template::Plugin::Time::Duration'; #
requires 'Test::YAML::Valid'; #
requires 'Test::Pod::Coverage'; #
requires 'Text::Glob'; #
requires 'Text::MultiMarkdown'; #
requires 'Time::Duration'; #
requires 'WWW::Mechanize'; #
requires 'XML::Simple'; #
requires 'YAML'; #
#catalyst;
# The PSGI/Plack/Starman stack
requires 'Plack::Test::Adopt::Catalyst'; #
requires 'Plack::App::Proxy'; #
requires 'Plack::Middleware::ServerStatus::Lite';
requires 'Task::Plack'; #
requires 'Catalyst::Controller::Metal'; #
#requires 'Catalyst::Engine::PSGI'; #
requires 'Catalyst::Helper::PSGI'; #
requires 'Starman'; #
requires 'URI::Escape::XS';
requires 'Log::Any::Adapter::Log4perl'; # cache logging
# Testing:
requires 'Readonly';
install_script glob('script/*.pl');
auto_install;
WriteAll;
mkdir('logs',0775);
mkdir('server-status',0775);