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Additional attribute request (Species/Split_into/Merged_into) CalTech #305

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Paul-Davis opened this issue Jul 3, 2020 · 7 comments
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@Paul-Davis
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Split from #304

@azurebrd - It would also be useful (for Caltech) to have the Species, Split_into, and Merged_into, but it's fine if it's out of scope.

@Paul-Davis
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Species has been added to the nameserver wb-names-export.jar dumper

@azurebrd
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azurebrd commented Jul 3, 2020

Cool, thanks Paul :)

@Paul-Davis
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I think this can be closed as @azurebrd can query the NS via the api for the additional atributes?

@Paul-Davis
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@azurebrd could you close it that's true :)

@azurebrd
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Thanks, @Paul-Davis :) I'm getting the genes nightly with the wb-names-export.jar because it would take too long to query through the API. Should wb-names-export.jar be dumping split_into and merged_into ? If it is, I need to check why it's not, and if it's not, could it ? If it can, that's great. If it can't, that's also okay, we can just keep getting that from the geneace dump when that gets updated. Thanks !

@Paul-Davis
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@azurebrd so for now the wb-names-export.jar will not be including these attributes so the merge data will need to come from geneace. The genes.ace.gz file has all the merge/split data but can be up to 7 days behind the NS.

@azurebrd
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@Paul-Davis Cool cool, I'm good with it as it is then, thanks :)

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