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[Bug]: response of TaxonWorks web api https://sfg.taxonworks.org/api/v1 inconsistent #3940

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jhpoelen opened this issue May 8, 2024 · 0 comments
Open

[Bug]: response of TaxonWorks web api https://sfg.taxonworks.org/api/v1 inconsistent #3940

jhpoelen opened this issue May 8, 2024 · 0 comments
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bug An existing function is broken.

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@jhpoelen
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jhpoelen commented May 8, 2024 •
edited

Steps to reproduce the bug

1. go back in time to 2023-08-16*
2. access https://sfg.taxonworks.org/api/v1
3. inspect results
4. time travel to 2024-05-07**
5. access https://sfg.taxonworks.org/api/v1
6. compare responses from 2. with 5.

Expected result: the structure of the responses to https://sfg.taxonworks.org/api/v1 is the same: the "v1" implies that the API is versioned and should be stable.

Actual result: the structure of the responses to https://sfg.taxonworks.org/api/v1 are different.

*/** If you don't have a time machine, you can use the following versioned archives to access the 2023-08-16 and 2024-05-07 results.

Poelen, J. H. (2023). A biodiversity dataset graph: Biological Associations in TaxonWorks hash://sha256/a4d651aac5220487835e6178511886e98b845b2d98cb7c5447fb2b042e0654d2 hash://md5/849edbe55e31e54ea5cdaba0188c5655 (0.2) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.8253729

Poelen, J. H. (2024). A biodiversity dataset graph: Biological Associations in TaxonWorks hash://sha256/e4a47c067d6c125da60c9a1b92b5eecdea539cb8666cd3aed99db347ae5b8ed0 hash://md5/686007de79cc2a49ab23fd3debe56e3f (0.3) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.11151783

2023-08-16 response was retrieved via

preston alias\
 --anchor\
 hash://sha256/a4d651aac5220487835e6178511886e98b845b2d98cb7c5447fb2b042e0654d2\
 https://sfg.taxonworks.org/api/v1\
 | head -n1\
 | preston cat\
 | jq .

to produce:

{
  "success": true,
  "open_projects": [
    {
      "UndtpSwdHsSRw8K3ddsTNQ": "Terrestrial Parasite Tracker (TPT)"
    },
    {
      "VVpT9aMPkqtnzmRVUx5jtg": "Opiliones of the World"
    },
    {
      "adhBi59dc13U7RxbgNE5HQ": "Universal Chalcidoidea Database (UCD)"
    },
    {
      "c5lh0vgnBGTOQDOSfRYC8g": "Global Lepidoptera Index"
    },
    {
      "BS2jGvMz1w4CDxZyQ1h1Qg": "UNH Insects"
    },
    {
      "JHfGs7VYEihc5QkqvKnvxw": "Ceraphronoids"
    },
    {
      "Rugp5rLnuhLu8qA3yzKTVw": "Cucujoidea World Catalog"
    },
    {
      "ekMTicbZWijqmdpHKqs_TA": "Purdue Entomological Research Collection"
    },
    {
      "iu4ty6tOdWg_-cceoQjhyQ": "Odonata"
    },
    {
      "X4DtgGPunYwPr9NEjH-SoQ": "Small Beetle Groups"
    },
    {
      "e-udR-5oT2THWfw9dLMJbw": "Dung_Beetles"
    },
    {
      "Ots0-yen4dVefn0Etyxvgw": "Curculionidae"
    },
    {
      "6IWD_06Pw-N2BRLtA20W8w": "Aphelinidae Workshop"
    },
    {
      "2GkoX1NjlZylDmr6dDpQ6g": "Frost Museum"
    },
    {
      "ZEJhFp9sq8kBfks15qAbAg": "3i World Auchenorrhyncha Database"
    },
    {
      "xQ9bKrhfQtHYfro9t6YY0A": "INHS Insect Collection"
    },
    {
      "FV3se0XDYEdAQH_2pojdGA": "Tenebrionidae"
    },
    {
      "DKwGc6rqkWHHUDwz9SM2Sw": "Ephedra Monograph"
    }
  ]
}

The 2024-05-07 response was retrieve via:

preston alias\
 --anchor\
 hash://sha256/e4a47c067d6c125da60c9a1b92b5eecdea539cb8666cd3aed99db347ae5b8ed0\
 https://sfg.taxonworks.org/api/v1\
 | head -n1\
 | preston cat\
 | jq .

to produce

{
  "success": true,
  "open_projects": [
    {
      "name": "Fireflies",
      "project_token": "A5vK_pGWO-as-gL8bTjQhg",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Terrestrial Parasite Tracker (TPT)",
      "project_token": "UndtpSwdHsSRw8K3ddsTNQ",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Opiliones of the World",
      "project_token": "VVpT9aMPkqtnzmRVUx5jtg",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Universal Chalcidoidea Database (UCD)",
      "project_token": "adhBi59dc13U7RxbgNE5HQ",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Global Lepidoptera Index",
      "project_token": "c5lh0vgnBGTOQDOSfRYC8g",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "UNH Insects",
      "project_token": "BS2jGvMz1w4CDxZyQ1h1Qg",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Cynipidae",
      "project_token": "XNQXg87H4cti7FAs-NhsHQ",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Cucujoidea World Catalog",
      "project_token": "Rugp5rLnuhLu8qA3yzKTVw",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Platygastroidea",
      "project_token": "JHfGs7VYEihc5QkqvKnvxw",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Isoptera Species File",
      "project_token": "CkxD15vOFrXd-kq2QchPig",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/isoptera/issues"
    },
    {
      "name": "Anthribidae",
      "project_token": "O9hB_UOpheOP26yyLk0t1A",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Purdue Entomological Research Collection",
      "project_token": "ekMTicbZWijqmdpHKqs_TA",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Odonata",
      "project_token": "iu4ty6tOdWg_-cceoQjhyQ",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Trilobites and Ammonites",
      "project_token": "NwDdMde5__27Q7McrZm7Ng",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Dung_Beetles",
      "project_token": "e-udR-5oT2THWfw9dLMJbw",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Curculionidae",
      "project_token": "Ots0-yen4dVefn0Etyxvgw",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Aphelinidae Workshop",
      "project_token": "6IWD_06Pw-N2BRLtA20W8w",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Frost Museum",
      "project_token": "2GkoX1NjlZylDmr6dDpQ6g",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Small Beetle Groups",
      "project_token": "GOYa5sp62ZYA1sCB_S3YFg",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "World Ichneumonidae Database (WID)",
      "project_token": "nOnhTWA3rt1Bs92dEAm7fw",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "INHS Insect Collection",
      "project_token": "xQ9bKrhfQtHYfro9t6YY0A",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Tenebrionidae",
      "project_token": "FV3se0XDYEdAQH_2pojdGA",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Ephedra Monograph",
      "project_token": "DKwGc6rqkWHHUDwz9SM2Sw",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "AntWeb",
      "project_token": "X2ldC5XeEgGtLlgxgmv6nQ",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Orthoptera Species File",
      "project_token": "3oerVKf82_196cIECvHYNg",
      "data_curation_issue_tracker_url": "https://github.com/sfg-taxonpages/orthoptera/issues/"
    },
    {
      "name": "Coleorrhyncha Species File",
      "project_token": "L0sAnBlkVb53ZBbfP-ljzQ",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/coleorrhyncha/issues"
    },
    {
      "name": "Coreoidea Species File",
      "project_token": "Tlferm5Ow1YUIc_Y1pxo7g",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Chrysididae Species File",
      "project_token": "CPs7hB7_HeYJd9EgQTWFmw",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Plecoptera Species File",
      "project_token": "7JgzFyTsllL_1WuwvcQ_Zw",
      "data_curation_issue_tracker_url": "https://github.com/sfg-taxonpages/plecoptera/issues"
    },
    {
      "name": "Phasmida Species File",
      "project_token": "RijJjUChacO20MdXjGvfcA",
      "data_curation_issue_tracker_url": "https://github.com/sfg-taxonpages/phasmida/issues/"
    },
    {
      "name": "Aphid Species File",
      "project_token": "2_njyXetAKy0N1nPmcxSbg",
      "data_curation_issue_tracker_url": "https://github.com/sfg-taxonpages/aphid/issues"
    },
    {
      "name": "Cockroach Species File",
      "project_token": "rABfQ7Q0gtV8m-Nb-BvajQ",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/cockroach/issues"
    },
    {
      "name": "Dermaptera Species File",
      "project_token": "_L4oel1yVzRUqC3OSzov1Q",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/dermaptera/issues"
    },
    {
      "name": "Embioptera Species File",
      "project_token": "Z1pSOTIIDhFLdgh5Sks00Q",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/embioptera/issues"
    },
    {
      "name": "Grylloblattodea Species File",
      "project_token": "V10xfSavJssB8tLg6wsxOw",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/grylloblattodea/issues"
    },
    {
      "name": "Mantophasmatodea Species File",
      "project_token": "mpAaAUmdCaka4rJhjlG9tQ",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/mantophasmatodea/issues"
    },
    {
      "name": "Psocodea Species File",
      "project_token": "ZRZHC_HBMB9o5ATZHlQpVg",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/psocodea/issues"
    },
    {
      "name": "Zoraptera Species File",
      "project_token": "qUe8F1_JHiOJXoGIw8D1JA",
      "data_curation_issue_tracker_url": "https://www.github.com/sfg-taxonpages/zoraptera/issues"
    },
    {
      "name": "Lygaeoidea Species File",
      "project_token": "SyvvahECCRfi7odomcpfBQ",
      "data_curation_issue_tracker_url": "https://github.com/sfg-taxonpages/lygaeoidea/issues"
    },
    {
      "name": "Mantodea Species File",
      "project_token": "GLC3KrdNiy7vCF0izU-L3w",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "Syrphidae of Italy",
      "project_token": "pfqGdynettFI9-mB48_oGQ",
      "data_curation_issue_tracker_url": null
    },
    {
      "name": "3i World Auchenorrhyncha Database",
      "project_token": "ZEJhFp9sq8kBfks15qAbAg",
      "data_curation_issue_tracker_url": "https://github.com/sfg-taxonpages/hoppers/issues/"
    },
    {
      "name": "Afrotropical Bees",
      "project_token": "w0ikO81bhEa4YbbM1P2Dwg",
      "data_curation_issue_tracker_url": null
    }
  ]
}

Note the different structure.

related to globalbioticinteractions/globalbioticinteractions#373 (comment)

Screenshot

No response

Expected behavior

No response

Additional Screenshots

No response

Environment

Production

Sandbox Used

NA

Version

(no version noted in API responses as far as I can tell)

Browser Used

N/A
@jhpoelen jhpoelen added the bug An existing function is broken. label May 8, 2024
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