We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
[runzeli@login1 new]$/home/runzeli/miniconda3/envs/fastani/bin/fastANI --rl ref_list.txt --ql query_list.txt -o result.txt
Reference = [BK029815.fa, BK032807.fa, BK033580.fa, BK038328.fa, BK038489.fa, BK039825.fa, BK041711.fa, BK043269.fa, BK044867.fa, BK046057.fa, BK048405.fa, BK051286.fa, BK053742.fa, BK054346.fa, BK057040.fa, BK057093.fa, DQ431235.fa, FJ706171.fa, FJ706172.fa, JX570702.fa, JX570703.fa, JX570704.fa, JX570705.fa, JX570707.fa, JX570708.fa, JX570709.fa, JX570710.fa, JX570711.fa, JX570712.fa, JX570713.fa, JX570714.fa, KJ578758.fa, KJ578759.fa, KJ578760.fa, KJ578761.fa, KJ578763.fa, KJ578764.fa, KJ578766.fa, KJ578767.fa, KJ578768.fa, KJ578769.fa, KJ578771.fa, KJ578772.fa, KJ578773.fa, KJ578774.fa, KJ578775.fa, KJ578776.fa, KJ578777.fa, KJ578780.fa, KJ578781.fa, KJ578782.fa, KJ578785.fa, KJ578787.fa, KJ578788.fa, KJ578790.fa, KJ578791.fa, KJ722067.fa, KR902979.fa, KR902980.fa, KR902981.fa, KR902982.fa, KR902983.fa, KR902984.fa, KR902985.fa, KR902986.fa, KR902987.fa, KT934381.fa, KY926792.fa, KY926793.fa, LPPA1.fa, MF919491.fa, MF919505.fa, MF919515.fa, MF919516.fa, MF919522.fa, MF919533.fa, MG820632.fa, MG820633.fa, MG820634.fa, MG820635.fa, MG820636.fa, MG820637.fa, MG820638.fa, MG820639.fa, MG820640.fa, MG820641.fa, MG820642.fa, MG820643.fa, MG820644.fa, MG820645.fa, MN329678.fa, MN813675.fa, MN813677.fa, MN813679.fa, MN813683.fa, MN813688.fa, MN813689.fa, MN813690.fa, MN813691.fa, MN813692.fa, MT647607.fa, MW161461.fa, MW161462.fa, MW161463.fa, MW161464.fa, MW161465.fa, MW161466.fa, MW161467.fa, MW161468.fa, MW505928.fa, NC_009541.fa, NC_015453.fa, NC_015454.fa, NC_018834.fa, NC_018838.fa, NC_018839.fa, NC_018840.fa, NC_018841.fa, NC_018842.fa, NC_018845.fa, NC_018847.fa, NC_018849.fa, NC_018851.fa, NC_018852.fa, NC_022334.fa, NC_022335.fa, NC_022336.fa, NC_022337.fa, NC_022338.fa, NC_022339.fa, NC_022340.fa, NC_022341.fa, NC_022342.fa, NC_027294.fa, NC_027295.fa, NC_027333.fa, NC_027336.fa, NC_027346.fa, NC_027347.fa, NC_027354.fa, NC_027357.fa, NC_027361.fa, NC_027362.fa, NC_027367.fa, NC_027370.fa, NC_027371.fa, NC_027373.fa, NC_027376.fa, NC_027380.fa, NC_027385.fa, NC_027386.fa, NC_027389.fa, NC_027391.fa, NC_027392.fa, NC_027400.fa, NC_027401.fa, NC_027403.fa, NC_027405.fa, NC_027620.fa, NC_027621.fa, NC_027622.fa, NC_027623.fa, NC_027624.fa, NC_027625.fa, NC_027626.fa, NC_027627.fa, NC_027628.fa, NC_027629.fa, NC_027630.fa, NC_028694.fa, NC_028967.fa, NC_031003.fa, NC_031005.fa, NC_031084.fa, NC_031119.fa, NC_041954.fa, NC_041955.fa, NC_041956.fa, NC_041957.fa, ON557706.fa, OP491959.fa, OQ411034.fa] Query = [BK029815.fa, BK032807.fa, BK033580.fa, BK038328.fa, BK038489.fa, BK039825.fa, BK041711.fa, BK043269.fa, BK044867.fa, BK046057.fa, BK048405.fa, BK051286.fa, BK053742.fa, BK054346.fa, BK057040.fa, BK057093.fa, DQ431235.fa, FJ706171.fa, FJ706172.fa, JX570702.fa, JX570703.fa, JX570704.fa, JX570705.fa, JX570707.fa, JX570708.fa, JX570709.fa, JX570710.fa, JX570711.fa, JX570712.fa, JX570713.fa, JX570714.fa, KJ578758.fa, KJ578759.fa, KJ578760.fa, KJ578761.fa, KJ578763.fa, KJ578764.fa, KJ578766.fa, KJ578767.fa, KJ578768.fa, KJ578769.fa, KJ578771.fa, KJ578772.fa, KJ578773.fa, KJ578774.fa, KJ578775.fa, KJ578776.fa, KJ578777.fa, KJ578780.fa, KJ578781.fa, KJ578782.fa, KJ578785.fa, KJ578787.fa, KJ578788.fa, KJ578790.fa, KJ578791.fa, KJ722067.fa, KR902979.fa, KR902980.fa, KR902981.fa, KR902982.fa, KR902983.fa, KR902984.fa, KR902985.fa, KR902986.fa, KR902987.fa, KT934381.fa, KY926792.fa, KY926793.fa, LPPA1.fa, MF919491.fa, MF919505.fa, MF919515.fa, MF919516.fa, MF919522.fa, MF919533.fa, MG820632.fa, MG820633.fa, MG820634.fa, MG820635.fa, MG820636.fa, MG820637.fa, MG820638.fa, MG820639.fa, MG820640.fa, MG820641.fa, MG820642.fa, MG820643.fa, MG820644.fa, MG820645.fa, MN329678.fa, MN813675.fa, MN813677.fa, MN813679.fa, MN813683.fa, MN813688.fa, MN813689.fa, MN813690.fa, MN813691.fa, MN813692.fa, MT647607.fa, MW161461.fa, MW161462.fa, MW161463.fa, MW161464.fa, MW161465.fa, MW161466.fa, MW161467.fa, MW161468.fa, MW505928.fa, NC_009541.fa, NC_015453.fa, NC_015454.fa, NC_018834.fa, NC_018838.fa, NC_018839.fa, NC_018840.fa, NC_018841.fa, NC_018842.fa, NC_018845.fa, NC_018847.fa, NC_018849.fa, NC_018851.fa, NC_018852.fa, NC_022334.fa, NC_022335.fa, NC_022336.fa, NC_022337.fa, NC_022338.fa, NC_022339.fa, NC_022340.fa, NC_022341.fa, NC_022342.fa, NC_027294.fa, NC_027295.fa, NC_027333.fa, NC_027336.fa, NC_027346.fa, NC_027347.fa, NC_027354.fa, NC_027357.fa, NC_027361.fa, NC_027362.fa, NC_027367.fa, NC_027370.fa, NC_027371.fa, NC_027373.fa, NC_027376.fa, NC_027380.fa, NC_027385.fa, NC_027386.fa, NC_027389.fa, NC_027391.fa, NC_027392.fa, NC_027400.fa, NC_027401.fa, NC_027403.fa, NC_027405.fa, NC_027620.fa, NC_027621.fa, NC_027622.fa, NC_027623.fa, NC_027624.fa, NC_027625.fa, NC_027626.fa, NC_027627.fa, NC_027628.fa, NC_027629.fa, NC_027630.fa, NC_028694.fa, NC_028967.fa, NC_031003.fa, NC_031005.fa, NC_031084.fa, NC_031119.fa, NC_041954.fa, NC_041955.fa, NC_041956.fa, NC_041957.fa, ON557706.fa, OP491959.fa, OQ411034.fa] Kmer size = 16 Fragment length = 3000 Threads = 1 ANI output file = result.txt
ERROR, skch::validateInputFiles, Could not open BK029815.fa [runzeli@login1 new]$
The text was updated successfully, but these errors were encountered:
No branches or pull requests
[runzeli@login1 new]$/home/runzeli/miniconda3/envs/fastani/bin/fastANI --rl ref_list.txt --ql query_list.txt -o result.txt
Reference = [BK029815.fa, BK032807.fa, BK033580.fa, BK038328.fa, BK038489.fa, BK039825.fa, BK041711.fa, BK043269.fa, BK044867.fa, BK046057.fa, BK048405.fa, BK051286.fa, BK053742.fa, BK054346.fa, BK057040.fa, BK057093.fa, DQ431235.fa, FJ706171.fa, FJ706172.fa, JX570702.fa, JX570703.fa, JX570704.fa, JX570705.fa, JX570707.fa, JX570708.fa, JX570709.fa, JX570710.fa, JX570711.fa, JX570712.fa, JX570713.fa, JX570714.fa, KJ578758.fa, KJ578759.fa, KJ578760.fa, KJ578761.fa, KJ578763.fa, KJ578764.fa, KJ578766.fa, KJ578767.fa, KJ578768.fa, KJ578769.fa, KJ578771.fa, KJ578772.fa, KJ578773.fa, KJ578774.fa, KJ578775.fa, KJ578776.fa, KJ578777.fa, KJ578780.fa, KJ578781.fa, KJ578782.fa, KJ578785.fa, KJ578787.fa, KJ578788.fa, KJ578790.fa, KJ578791.fa, KJ722067.fa, KR902979.fa, KR902980.fa, KR902981.fa, KR902982.fa, KR902983.fa, KR902984.fa, KR902985.fa, KR902986.fa, KR902987.fa, KT934381.fa, KY926792.fa, KY926793.fa, LPPA1.fa, MF919491.fa, MF919505.fa, MF919515.fa, MF919516.fa, MF919522.fa, MF919533.fa, MG820632.fa, MG820633.fa, MG820634.fa, MG820635.fa, MG820636.fa, MG820637.fa, MG820638.fa, MG820639.fa, MG820640.fa, MG820641.fa, MG820642.fa, MG820643.fa, MG820644.fa, MG820645.fa, MN329678.fa, MN813675.fa, MN813677.fa, MN813679.fa, MN813683.fa, MN813688.fa, MN813689.fa, MN813690.fa, MN813691.fa, MN813692.fa, MT647607.fa, MW161461.fa, MW161462.fa, MW161463.fa, MW161464.fa, MW161465.fa, MW161466.fa, MW161467.fa, MW161468.fa, MW505928.fa, NC_009541.fa, NC_015453.fa, NC_015454.fa, NC_018834.fa, NC_018838.fa, NC_018839.fa, NC_018840.fa, NC_018841.fa, NC_018842.fa, NC_018845.fa, NC_018847.fa, NC_018849.fa, NC_018851.fa, NC_018852.fa, NC_022334.fa, NC_022335.fa, NC_022336.fa, NC_022337.fa, NC_022338.fa, NC_022339.fa, NC_022340.fa, NC_022341.fa, NC_022342.fa, NC_027294.fa, NC_027295.fa, NC_027333.fa, NC_027336.fa, NC_027346.fa, NC_027347.fa, NC_027354.fa, NC_027357.fa, NC_027361.fa, NC_027362.fa, NC_027367.fa, NC_027370.fa, NC_027371.fa, NC_027373.fa, NC_027376.fa, NC_027380.fa, NC_027385.fa, NC_027386.fa, NC_027389.fa, NC_027391.fa, NC_027392.fa, NC_027400.fa, NC_027401.fa, NC_027403.fa, NC_027405.fa, NC_027620.fa, NC_027621.fa, NC_027622.fa, NC_027623.fa, NC_027624.fa, NC_027625.fa, NC_027626.fa, NC_027627.fa, NC_027628.fa, NC_027629.fa, NC_027630.fa, NC_028694.fa, NC_028967.fa, NC_031003.fa, NC_031005.fa, NC_031084.fa, NC_031119.fa, NC_041954.fa, NC_041955.fa, NC_041956.fa, NC_041957.fa, ON557706.fa, OP491959.fa, OQ411034.fa]
Query = [BK029815.fa, BK032807.fa, BK033580.fa, BK038328.fa, BK038489.fa, BK039825.fa, BK041711.fa, BK043269.fa, BK044867.fa, BK046057.fa, BK048405.fa, BK051286.fa, BK053742.fa, BK054346.fa, BK057040.fa, BK057093.fa, DQ431235.fa, FJ706171.fa, FJ706172.fa, JX570702.fa, JX570703.fa, JX570704.fa, JX570705.fa, JX570707.fa, JX570708.fa, JX570709.fa, JX570710.fa, JX570711.fa, JX570712.fa, JX570713.fa, JX570714.fa, KJ578758.fa, KJ578759.fa, KJ578760.fa, KJ578761.fa, KJ578763.fa, KJ578764.fa, KJ578766.fa, KJ578767.fa, KJ578768.fa, KJ578769.fa, KJ578771.fa, KJ578772.fa, KJ578773.fa, KJ578774.fa, KJ578775.fa, KJ578776.fa, KJ578777.fa, KJ578780.fa, KJ578781.fa, KJ578782.fa, KJ578785.fa, KJ578787.fa, KJ578788.fa, KJ578790.fa, KJ578791.fa, KJ722067.fa, KR902979.fa, KR902980.fa, KR902981.fa, KR902982.fa, KR902983.fa, KR902984.fa, KR902985.fa, KR902986.fa, KR902987.fa, KT934381.fa, KY926792.fa, KY926793.fa, LPPA1.fa, MF919491.fa, MF919505.fa, MF919515.fa, MF919516.fa, MF919522.fa, MF919533.fa, MG820632.fa, MG820633.fa, MG820634.fa, MG820635.fa, MG820636.fa, MG820637.fa, MG820638.fa, MG820639.fa, MG820640.fa, MG820641.fa, MG820642.fa, MG820643.fa, MG820644.fa, MG820645.fa, MN329678.fa, MN813675.fa, MN813677.fa, MN813679.fa, MN813683.fa, MN813688.fa, MN813689.fa, MN813690.fa, MN813691.fa, MN813692.fa, MT647607.fa, MW161461.fa, MW161462.fa, MW161463.fa, MW161464.fa, MW161465.fa, MW161466.fa, MW161467.fa, MW161468.fa, MW505928.fa, NC_009541.fa, NC_015453.fa, NC_015454.fa, NC_018834.fa, NC_018838.fa, NC_018839.fa, NC_018840.fa, NC_018841.fa, NC_018842.fa, NC_018845.fa, NC_018847.fa, NC_018849.fa, NC_018851.fa, NC_018852.fa, NC_022334.fa, NC_022335.fa, NC_022336.fa, NC_022337.fa, NC_022338.fa, NC_022339.fa, NC_022340.fa, NC_022341.fa, NC_022342.fa, NC_027294.fa, NC_027295.fa, NC_027333.fa, NC_027336.fa, NC_027346.fa, NC_027347.fa, NC_027354.fa, NC_027357.fa, NC_027361.fa, NC_027362.fa, NC_027367.fa, NC_027370.fa, NC_027371.fa, NC_027373.fa, NC_027376.fa, NC_027380.fa, NC_027385.fa, NC_027386.fa, NC_027389.fa, NC_027391.fa, NC_027392.fa, NC_027400.fa, NC_027401.fa, NC_027403.fa, NC_027405.fa, NC_027620.fa, NC_027621.fa, NC_027622.fa, NC_027623.fa, NC_027624.fa, NC_027625.fa, NC_027626.fa, NC_027627.fa, NC_027628.fa, NC_027629.fa, NC_027630.fa, NC_028694.fa, NC_028967.fa, NC_031003.fa, NC_031005.fa, NC_031084.fa, NC_031119.fa, NC_041954.fa, NC_041955.fa, NC_041956.fa, NC_041957.fa, ON557706.fa, OP491959.fa, OQ411034.fa]
Kmer size = 16
Fragment length = 3000
Threads = 1
ANI output file = result.txt
ERROR, skch::validateInputFiles, Could not open BK029815.fa
[runzeli@login1 new]$
The text was updated successfully, but these errors were encountered: